Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2791 ATGTCGGTGAAAGAGTGTGAGCACCACAAGGGGTGTCGCCGGAAAATATTCCGAAGAATCTTTGCGGGGATCCTTATATTCCTGCTGATAGTTCTGCTGACGATTCTAATAATCTGGGCCGTCCTGAAGCCTTCCAAACCATCCTTCACCCTCCAGGACGTGACCGTGTATGCCTTCAATGCCACCGTACCCAACTTCCTGACCACGAGTTTCCAAGTGACCCTGTTGTCCCGCAACCCCAACGGAAGGATCGGAATCTACTACGATCGTCTCGACACCTACGTCGACTATCGCAACCAGCAAGTCACGTATCGCACGGCCATCCCTCCCTCGTACCAGGGTCACAAGGAGGTCGACGTCTGGTCACCCTTCGTCTACGGGAACAACGTACCCGTGGCTCCTTACAACTTCGTCGGTCTGAGTCAGGACCAGTCCTCCGGCAACATTCTGGTGACAATCAAGATCGACGGACGGGTCAGATGGAAAGTCGGGACCTTCGTTTCCGGCCGATACCATATCTACATCAGGTGCCCCGCTTACATCAACTGGGGATCCCAGAGCTCTGCCTCCGCCGTCAAGTATCAGTTGGTCCAGCGATGCTCTGTTAGCGTCTGA 615 0.5447 MSVKECEHHKGCRRKIFRRIFAGILIFLLIVLLTILIIWAVLKPSKPSFTLQDVTVYAFNATVPNFLTTSFQVTLLSRNPNGRIGIYYDRLDTYVDYRNQQVTYRTAIPPSYQGHKEVDVWSPFVYGNNVPVAPYNFVGLSQDQSSGNILVTIKIDGRVRWKVGTFVSGRYHIYIRCPAYINWGSQSSASAVKYQLVQRCSVSV 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2791 204 PANTHER OS05G0367900 PROTEIN 17 202 IPR044839 GO:0098542
Prci3g2791 204 Pfam Late embryogenesis abundant protein 74 176 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2791 Prci-Chr3 39932331 39933431 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2791 9 177 EF-hand Containing Proteins AT5G21130 21.302 1.90e-09 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2791 - - gmx:100788592 316.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3017 1 48808787 48809983 Prci3g2791 3 39932331 39933431 CCT
Prci3g2791 3 39932331 39933431 Prci3g2791 3 39932331 39933431 ECH