Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3017 ATGACCGACGCCAAGAATATAAAAGTGTGTGACCACCACAAGGATAAGCGCAGGAAGATCTTCCGCCGAATATTCGCGGGGATCCTCATCTTCCTGCTCATAGTTCTCGTCACCATACTCATAATCTGGGCAATTCTCCGTCCTTCCAAGCCCGCCTTCATCCTCCAAGACGTCACCGTTTACGCCTTCAACGCCTCCGTCCCTAACTTTCTCACCTCCAACTTCCAAGTCACGCTCTCTTCCCGGAATCCCAACGACAAGATCGGGATCTACTACGACCGTCTTGACGCCTACGTCAGCTACCAGAACCAGCAAATTACCTACCGCACATCGATCCCGCCCTCGTATCAGGGTCACGACGAGGTCGACGTCTGGTCGCCATTCGTCTACGGTACAAACGTGCCCGTGGCTCCCTTCAACTTCGTCACCCTGAGTCAGGATCAGTCCAACGGCAACGTCCTCGTCATCATCAAAATTGACGGACGCGTGAGATGGAAAGTCGGGGCCTTCATTTCCGGCCGTTACCACATCTACGTACGGTGCCCGGCGTTTATCACTTTCGGCCCCCGGAGTAACGGGATTGTCGTGGGTGAGAACGCCGTGAAGTATCAGCTGGTCCAGCGATGCACCGTGAGTGTCTGA 642 0.5467 MTDAKNIKVCDHHKDKRRKIFRRIFAGILIFLLIVLVTILIIWAILRPSKPAFILQDVTVYAFNASVPNFLTSNFQVTLSSRNPNDKIGIYYDRLDAYVSYQNQQITYRTSIPPSYQGHDEVDVWSPFVYGTNVPVAPFNFVTLSQDQSNGNVLVIIKIDGRVRWKVGAFISGRYHIYVRCPAFITFGPRSNGIVVGENAVKYQLVQRCTVSV 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3017 213 PANTHER OS05G0367900 PROTEIN 21 202 IPR044839 GO:0098542
Prci1g3017 213 Pfam Late embryogenesis abundant protein 78 181 IPR004864 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3017 Prci-Chr1 48808787 48809983 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3017 17 181 EF-hand Containing Proteins AT5G21130 23.121 3.26e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3017 - - pcin:129298866 331.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3017 1 48808787 48809983 Prci3g2791 3 39932331 39933431 CCT
Prci1g3017 1 48808787 48809983 Prci1g3017 1 48808787 48809983 ECH