Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2697 ATGCTGACCGTGATTCGCGTACACCTCCCTTCTGATATACCCATTGTAGGATGTGAGCTCACGCCGTACGTTCTCATACAGCGACCAGACATGATTGTTACCAACGACGATGTCCCTGAGACGGCCCCTTTAGATGGCCATTTCTTGCGGTACAGGTGGTATCGTGTACAAAGTGATAAAAAGGTTGCCGTTTGTAGCATACATCCATCTGAACAGGCCACACTGCAGTGCCTTGGCTGTGTTAAGGCTAAAATACCTATTACCAAAAGTTATCACTGCACACCAAAGTGTTTTTCAGATGCATGGCAGCATCATCGTCTTTTACATGATCGTGCTGCAAGTGCAGTTAATGAAAATGGAACTGAAGAGGAGGAACTATTTGGACGCGATAATAGCTCTGGCTCTGGGGCAGTTAATAACAATTTATCTAGCTCTGCTTCAAGTGCTAGTTTGGCAAATGTGTCTGCTCCTCTATATCCAGCTGCTGTTACACAACGAAGTGGTGGTGAAACTTGGATTGAAGTTGGACGATCTAAAACGTATACCCCAACAGCTGATGATATTGGTCATGTCCTTAATTTTGAGTGTGTTGTAGTTGATGCAGAGGCAAAAGTTCCTGTAGGGCATGTTAATACTATACTAACTTCTCGTGTTATTCCTGCTCCCTCTCCTATTCCACGCCGTTTGATTCCTGTTGATGGGATGGCACATATAGATGCAGATGCACGCATAACATCTTCAGGAACATTTACAGTTCTATCTTACAACATTTTGTCTGATGCATATGCTTCAAATGATTTATATAGTTACTGTCCTCCATGGGCTCTTTCTTGGCCATATCGCAGGCAAAATTTGTTAAGAGAAATTGTTGGTTACCAGGCAGATATTGTTTGTCTTCAGGAGGTACAAGGTGATCATTATGAGGATTTTTTTGCCCCTGAACTGGACAAACATGGTTATTATGGTCTATACAAGAGGAAAACCAATGAGATATTTGGCGGCAACACCAGCACAGTTGATGGTTGTGCAACATTTTTCCGTAGAGACAGATTTTCACATGTGAAGAAATATGAGGTTGAATTTAACAAGGCTGCACAGTCTTTAACAGATGCTATGATTCCAACTGGCCAGAAGAAAACTGCATTAAATCGGCTGGTTAAGGACAATGTTGCACTAATTGTGGTTCTAGAAGCAAAAGTTAGCAATCAGCTAGTTGACAATCCTGGAAAAAGACAGCTTCTTTGTGTGGCAAATACACATGTACATGTGCACCAAGATTTAAAAGATGTTAAACTCTGGCAGGTGCACACACTCTTAAAAGGGTTGGAGAAAATTGCTGCAAGTGCAGACATTCCAATGTTGGTTTGTGGAGATTTTAATTCAGTTCCTGGAAGTGCTCCACATGCACTTCTTGCATTGGGGAAGGTTGATCAAACGCATCCAGATTTAGCAGTTGATCCACTCAATATACTTCGGCCACACAACAAGTTGGTTCATCAATTGCCACTGGTTAGTGCATACTCATCCTTTGGAAGAACGGTAGGTCTTGGATTTGAGCAGCACAGAAGGAGAGTGGATAGTGCAACAAATGAACCTTTGTTCACAAATGTTACCAGGGATTTTATTGGCACTCTAGATTACATATTTTACACAGCGGATTCATTGGTGGTGGAGTCACTGTTGGAGCTATTGGATGAGGAGAGTTTAAGGAAAGACACAGCACTTCCCTCTCCTGAATGGTCATCTGATCATATAGCTCTGTTAGCTGAATTTCGCTGCTGCAAGAATAGATCCAGGCGTTAA 1803 0.4226 MLTVIRVHLPSDIPIVGCELTPYVLIQRPDMIVTNDDVPETAPLDGHFLRYRWYRVQSDKKVAVCSIHPSEQATLQCLGCVKAKIPITKSYHCTPKCFSDAWQHHRLLHDRAASAVNENGTEEEELFGRDNSSGSGAVNNNLSSSASSASLANVSAPLYPAAVTQRSGGETWIEVGRSKTYTPTADDIGHVLNFECVVVDAEAKVPVGHVNTILTSRVIPAPSPIPRRLIPVDGMAHIDADARITSSGTFTVLSYNILSDAYASNDLYSYCPPWALSWPYRRQNLLREIVGYQADIVCLQEVQGDHYEDFFAPELDKHGYYGLYKRKTNEIFGGNTSTVDGCATFFRRDRFSHVKKYEVEFNKAAQSLTDAMIPTGQKKTALNRLVKDNVALIVVLEAKVSNQLVDNPGKRQLLCVANTHVHVHQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLALGKVDQTHPDLAVDPLNILRPHNKLVHQLPLVSAYSSFGRTVGLGFEQHRRRVDSATNEPLFTNVTRDFIGTLDYIFYTADSLVVESLLELLDEESLRKDTALPSPEWSSDHIALLAEFRCCKNRSRR 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2697 600 SUPERFAMILY DNase I-like 245 594 IPR036691 -
Prci3g2697 600 Pfam Endonuclease/Exonuclease/phosphatase family 253 584 IPR005135 GO:0003824
Prci3g2697 600 FunFam Carbon catabolite repressor protein 4 1 219 598 - -
Prci3g2697 600 Gene3D Endonuclease/exonuclease/phosphatase 222 599 IPR036691 -
Prci3g2697 600 MobiDBLite consensus disorder prediction 118 140 - -
Prci3g2697 600 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 161 593 - -
Prci3g2697 600 CDD Deadenylase_CCR4 252 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2697 Prci-Chr3 39410951 39417321 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2697 K12603 - qsa:O6P43_009444 1066.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3149 1 49487181 49493148 Prci3g2697 3 39410951 39417321 CCT
Prci3g2697 3 39410951 39417321 Prci3g2697 3 39410951 39417321 ECH