Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3149 ATGCTGAGCGTGCTACGGGTGCACCTTCCCTCTGATATACCCATTGTTGGATGTGAGCTTACGCCGTACGTGCTCCTACGGCGACCTGATAAGCCTGTTACCACCGACGATGTGCCAGAGTCAGCCCCAATAGACGGCCATTTCCTACGTTACAAGTGGTATCGTGTGCAAAGTGATAAAAAGGTTGCTGTCTGTAGTGTACATCCATCTGAACAGGCCACACTGCAGTGCCTTGGTTGTGTTAAAGCCAAAATACCTGTTTCTAAAAGCTACCATTGCACACCAAAGTGCTTTTCAGATGCATGGCAGCATCATCGTGTCCTTCATGATCGTGCTGCAAGTGCTGTTAATGAAAATGGGAATGAGGAAGAGGAGGTATTTGGTCGCTTTAATAGTTCTGGATCTGGGGTAATCAATAATAGCTTGTCTAGCTCTGCATCAAGTGCTGCATTGACAAATGGGTCTGCACAGTTGTATCCATCAGCTGTTACACAACGAAGTGGTGGTGAAACTTGGATTGAAGTAGGACGATCAAAAACATATACCCCAACAGTTGATGACATTGGTCATATCTTAAAATTTGAGTGTGCAGTAGTTGATGCAGAGACAAAGCTTCCTGTGGGACATGTCAACACTATACTAACCTCCCGTGTCATTCCTGCACCATCGCCTAGTCCACGCCGCCTGATACCTGTTGATGGGATGGGACCCTTAGATGCTGATGGACGCATAACATCTTCAGGATCTTTTACTGTCCTATCATACAACATTTTGTCTGATGCATATGCGTCAAATGATTTATACAGTTACTGCCCTTCATGGGCTCTTTCTTGGCCATACCGTAGACAAAATTTGTTAAGAGAAATAGTTGGGTATCGTGCAGACATTATTTGCCTTCAGGAGGTCCAAAGTGATCATTATGAAGAATTTTTTTCTCCCGAATTGGACAAACATGGATATTATGGTTTATATAAGAGAAAAACAAATGAGGTATATGGTGGGAACAGCCATATAATTGATGGCTGTGCGACATTTTTCCGCAGAGACAAATTCTCGCATGTGAAGAAATATGAGGTTGAATTTAATAAGGCTGCGCAGTCTTTAACAGATGCCATGATTCCAACCACACAGAAGAAAACTGCTTTAAATCGGCTTGTCCAGGATAATGTTGCTCTAATAGTGGTTCTAGAAGCGAAAGTTGCCAACCAGCCAATTGATAATCCTGGGAAAAGGCAGCTTCTTTGTGTGGCTAATACACATGTAAACGTTCACCAAGATCTGAAGGATGTCAAACTCTGGCAGGTGCATACTCTTTTAAAGGGGTTAGAAAAAATAGCTGCAAGTGCAGACATTCCAATGCTGGTTTGTGGAGATTTTAATTCAGTTCCTGGAAGTGCCCCTCATGCACTTCTTGCAATGGGGAAGGTAGACAACTTACATCCTGATTTAGCTGTTGATCCTCTCAGTATCTTGCGTCCCTACAGCAAGCTGGTTCATCAGCTGCCACTGGTTAGTGCATACTCTTCTTTTGCAAGAACAGTAGGTCTTGGCTTTGAGCAGCACAAAAGGAGACTGGACAGTGCGACAAATGAACCCTTGTTCACAAATGTCACTAGAGATTTTATTGGGACTCTAGATTACATCTTTTATACAGCGGATTCTTTGGTGGTGGAGTCACTGTTGGAGCTATTGGACGAGGAGAGTTTGAGGAAAGACACAGCACTTCCTTCTCCCGAATGGTCCTCAGATCATATAGCTCTGTTAGCGGAGTTTCGTTGCTGCAAGAATAGATCTAGGCGTTGA 1803 0.437 MLSVLRVHLPSDIPIVGCELTPYVLLRRPDKPVTTDDVPESAPIDGHFLRYKWYRVQSDKKVAVCSVHPSEQATLQCLGCVKAKIPVSKSYHCTPKCFSDAWQHHRVLHDRAASAVNENGNEEEEVFGRFNSSGSGVINNSLSSSASSAALTNGSAQLYPSAVTQRSGGETWIEVGRSKTYTPTVDDIGHILKFECAVVDAETKLPVGHVNTILTSRVIPAPSPSPRRLIPVDGMGPLDADGRITSSGSFTVLSYNILSDAYASNDLYSYCPSWALSWPYRRQNLLREIVGYRADIICLQEVQSDHYEEFFSPELDKHGYYGLYKRKTNEVYGGNSHIIDGCATFFRRDKFSHVKKYEVEFNKAAQSLTDAMIPTTQKKTALNRLVQDNVALIVVLEAKVANQPIDNPGKRQLLCVANTHVNVHQDLKDVKLWQVHTLLKGLEKIAASADIPMLVCGDFNSVPGSAPHALLAMGKVDNLHPDLAVDPLSILRPYSKLVHQLPLVSAYSSFARTVGLGFEQHKRRLDSATNEPLFTNVTRDFIGTLDYIFYTADSLVVESLLELLDEESLRKDTALPSPEWSSDHIALLAEFRCCKNRSRR 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3149 600 Gene3D Endonuclease/exonuclease/phosphatase 220 599 IPR036691 -
Prci1g3149 600 SUPERFAMILY DNase I-like 246 594 IPR036691 -
Prci1g3149 600 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 156 593 - -
Prci1g3149 600 Pfam Endonuclease/Exonuclease/phosphatase family 253 584 IPR005135 GO:0003824
Prci1g3149 600 FunFam Carbon catabolite repressor protein 4 1 219 598 - -
Prci1g3149 600 CDD Deadenylase_CCR4 252 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3149 Prci-Chr1 49487181 49493148 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3149 K12603 - qsa:O6P43_009444 1082.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3149 1 49487181 49493148 Prci3g2697 3 39410951 39417321 CCT
Prci1g3149 1 49487181 49493148 Prci1g3149 1 49487181 49493148 ECH