Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2615 ATGGGTTGGACTTTGCTCTTTTGGCTTCTATTCTGTTTCCCTCTCAACATTGCCCTCCTCGCCTCTACTTTCTACCAGCTTTTGATCTTGACGGACTTGGAAGCTGATTACGTCAACCCATATGATGCTTCATCTCGGATTAATTACTTCGTCCTTCCTGAGTTTATTGGGCAGGGGCTACTGTGTGCTCTCTTCCTCTTCACAGGGCACTGGTTCATGTTTTTGTTGACCGTTCCCCTTACTTGCTATCATGTGATGCTGTACGTGAAAAGGCAGCATCTCCTTGATGTCACTGAAGTGTTTAGGGTACTTAATTCTGAGAAGAAATATCGGATTGCTAAGCTTGCTTTCTACTTATCTCTCCTTCTCATCACTGTATTCAGGCTTACGTTATTTATTGTATACTATTTAGACCTTGATGATGACTGA 429 0.4266 MGWTLLFWLLFCFPLNIALLASTFYQLLILTDLEADYVNPYDASSRINYFVLPEFIGQGLLCALFLFTGHWFMFLLTVPLTCYHVMLYVKRQHLLDVTEVFRVLNSEKKYRIAKLAFYLSLLLITVFRLTLFIVYYLDLDDD 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2615 142 Pfam Cornichon protein 7 127 IPR003377 GO:0016192
Prci3g2615 142 PANTHER CORNICHON-RELATED 7 135 - -
Prci3g2615 142 SMART Cornichon_2 6 127 IPR003377 GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2615 Prci-Chr3 38845112 38848728 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2615 K20368 - gmx:100500341 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3235 1 50047916 50049515 Prci3g2615 3 38845112 38848728 CCT
Prci3g2615 3 38845112 38848728 Prci3g2615 3 38845112 38848728 ECH