Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3235 ATGGGTTGGAATTTGTTTTTCTGGCTTATAATTTGTTTCCCACTCAACCTTGCTCTTCTTGCTTCCACTTGTTATCAGATTCTGATCTTAACAGACTTGGAGGCTGACTATGTCAACCCATATGAGGCTTCCTCCCGGGTCAATTACTTCGTTGTTCCTGAGTTTATTGGGCAGGCGGCACTCTGCGCTCTTTTCCTCCTCACTGGGCACTGGTTCATGATCTTGGTCACAGTTCCTGTCACTGGCTACCATGTGATGCTGTATGCGAAACAGCAGCATCTTCTTGATGTCACTGAAATGTTTAGGGCAGTTCATGCCGAGAAGAAATACCGGATAGTCAAGTTTGCCTTGTATCTTTTGACTCTTGCTGTTGTTGTCTTCAGGATTATCGCTGCAGGAATAATATTATTTCACAATTTCAAGTTTGAGGATGTCCGGTCTACACTTTTTGAGTTCTAG 459 0.4357 MGWNLFFWLIICFPLNLALLASTCYQILILTDLEADYVNPYEASSRVNYFVVPEFIGQAALCALFLLTGHWFMILVTVPVTGYHVMLYAKQQHLLDVTEMFRAVHAEKKYRIVKFALYLLTLAVVVFRIIAAGIILFHNFKFEDVRSTLFEF 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3235 152 SMART Cornichon_2 6 127 IPR003377 GO:0016192
Prci1g3235 152 Pfam Cornichon protein 7 127 IPR003377 GO:0016192
Prci1g3235 152 PANTHER CORNICHON-RELATED 5 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3235 Prci-Chr1 50047916 50049515 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3235 K20368 - gmx:100819066 204.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3235 1 50047916 50049515 Prci3g2615 3 38845112 38848728 CCT
Prci1g3235 1 50047916 50049515 Prci1g3235 1 50047916 50049515 ECH