Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2290 ATGGAAAAGATTTGGATTTTGAAATGGGCATTGTTGGTTTGGATCATGAGTCGTCACGCGGAAGGGCTTGGTGTGAATTGGGGTACGCAGGCCACTCATCAGTTGCCTCCAGACACGGTGGTTCAAATGTTGAAGGACAATGGAATTCAAAAGGTGAAGCTGTTTGATTCAGCTGATTCCACCATGACTGCTCTGGCTGGTACGGGTATCGAAGTCATGGTTGCCATTCCTAATAATCAGCTTGCTGCGATGAATGACTATGATCGAGCTAAACAGTGGGTGAAAAAGAATGTTACACGTTACAACTTCAAAGGAGGGGTTAACATCAAGTATGTAGCAGTTGGGAATGAACCATTTTTAAAATCCTATAACAATTCATTCTTGAATATCACATTCCCAGCACTACAGAACATTCAAAATGCCCTTAACGAAGCTGGTGTTGGAGACACCATAAAAGCCACGGTGCCCTTAAATGCTGATGTGTATGAGTCCCCAGCAAATAATGCGGTTCCTTCTGCAGGAAGATTCAGGGCTGATATAAATGATCTCATGACCCAGATAGTCCAATTTATGAACAAGAATGGTGCACCATTCACTGCAGTGGGATATGGAGACATGACCATTTTGGTAGGAGAAGTAGGGTGGCCTACAGATGGTGACAAGAATGCCAACGTAGGCAACGCCTTAAGGTTTTACAGTGGGCTTTTACCACGGCTTGCAGCAAATAAAGGCACACCACTTCGCCCTGGATTCATTGAAGTTTATCTGTTTGGACTTATTGATGAAGATGCCAAGAGCATTTCTCCCGGTAACTTCGAGCGACACTGGGGAATATTCAGGTATGACGGGCAGCCAAAATTTCCAATGGATCTTTCCGGTCAGAATCAAAACAAGTTACTGGTAGGAGCGAGGAATGTGAAATATCTATCTTCAAAGTGGTGCATGTTTAACCCAAATGCCAAAGATCTCAGTAAACTTGCTGATAATATAAACTATGCATGTACCTTTGGAGACTGTACATCACTTGGATATGGGTCTTCTTGCAACAACCTGGATGCTAATGGGAATGCCTCATATGCATTTAACATGTATTACCAGGTGCAAAATCAGGATGACATGGCCTGCAATTTTCAAGGTTTGGCCAAGATTACCACACAGAATATTTCAACACCCACGTGCAATTTTGTGATTCAGATTTCATCATCCTCTTCTCTGATGTCCCCGTTGATAGCTTCCTTATTTATCACATTATCCATGATTCTATTTTTATAG 1272 0.4245 MEKIWILKWALLVWIMSRHAEGLGVNWGTQATHQLPPDTVVQMLKDNGIQKVKLFDSADSTMTALAGTGIEVMVAIPNNQLAAMNDYDRAKQWVKKNVTRYNFKGGVNIKYVAVGNEPFLKSYNNSFLNITFPALQNIQNALNEAGVGDTIKATVPLNADVYESPANNAVPSAGRFRADINDLMTQIVQFMNKNGAPFTAVGYGDMTILVGEVGWPTDGDKNANVGNALRFYSGLLPRLAANKGTPLRPGFIEVYLFGLIDEDAKSISPGNFERHWGIFRYDGQPKFPMDLSGQNQNKLLVGARNVKYLSSKWCMFNPNAKDLSKLADNINYACTFGDCTSLGYGSSCNNLDANGNASYAFNMYYQVQNQDDMACNFQGLAKITTQNISTPTCNFVIQISSSSSLMSPLIASLFITLSMILFL 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2290 423 Gene3D Glycosidases 201 299 - -
Prci3g2290 423 Gene3D Glycosidases 22 200 - -
Prci3g2290 423 Gene3D - 307 406 - -
Prci3g2290 423 SUPERFAMILY (Trans)glycosidases 23 290 IPR017853 -
Prci3g2290 423 Pfam X8 domain 312 381 IPR012946 -
Prci3g2290 423 Pfam Glycosyl hydrolases family 17 199 290 IPR000490 GO:0004553|GO:0005975
Prci3g2290 423 Pfam Glycosyl hydrolases family 17 23 198 IPR000490 GO:0004553|GO:0005975
Prci3g2290 423 FunFam Glucan endo-1,3-beta-glucosidase 8 308 404 - -
Prci3g2290 423 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 16 200 IPR044965 GO:0004553|GO:0005975
Prci3g2290 423 ProSitePatterns Glycosyl hydrolases family 17 signature. 206 219 IPR000490 GO:0004553|GO:0005975
Prci3g2290 423 SMART X8_cls 312 395 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2290 Prci-Chr3 36592927 36596632 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g2290 6 399 Miscellaneous Gene Families AT1G64760 65.169 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2290 - - gmx:100815300 703.745
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3612 1 52896813 52900318 Prci3g2290 3 36592927 36596632 CCT