Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g3612 ATGGGGAAATTTTGGATTTTGAAGTGGATTGTGGCAGTGGGGATCATGAGTTGGGATGTTGAAGGGCTTGGGGTGAACTGGGGAACTCAGGCAACGCATAAATTGCCGCCGGACACGGTGGTTCAGATGCTGAAAGACAACGGGATTCAGAAAGTGAAACTGTTCGATGCAGATGAGTCCACCATGAGTGCTCTGGCTGGGACTAATATTGAAGTCATGGTCGCCATTCCCAATAATCAGCTCGCTCCCATGAATAACTATGATAGGGCCAAACAGTGGGTTCGGAAGAATGTCACGCGTTACCACTTCAACGGAGGTGTCAACATCAAGTATGTAGCAGTAGGGAACGAGCCATTTTTGAAATCCTACAACAATTCATTCTTGAACATCACTTTACCAGCACTGCAGAACATCCAAAATGCCCTAAACGAAGCTGGCCATGGAGACACCATAAAGGCGACCGTGCCCTTGAATGCCGATGTGTATGAGTCTCCAGTAAACAACCCAGTTCCATCTGCTGGTAGATTCAGGGCAGACATAAATGATCTTATGACCCAAATAAGCCAATTCCTCAATAAGAATGGAGCACCATTCACAGTCAACATCTACCCCTTCTTAAGCCTTTATGGGAATGATGATTTCCCGTTTAACTATGCCTTCTTTGATGGGGTAACCAATCCCATAAACGACAATGGAATTCAATACACCAACGTTTTTGACGCTAACTTTGACACATTGGTTTCTGCTCTAACTGCAGTAGGGCTTGGGACTATGCCCGTTTTGGTAGGAGAAGTAGGGTGGCCCACAGATGGAGACAAGAATGCAAACGCAGGCAATGCCTTTAGATTTTACAATGGCCTTCTGCCTAGGCTTGCTGCCAATAAGGGCACGCCACGTCATCCTGGATATATAGAGGTCTATCTGTTTGGACTCATTGATGAAGATGCTAAGAGTGTTGCTCCAGGAAACTTTGAGCGTCACTGGGGGATTTTCAGGTATGATGGGCAACCCAAGTTTCCTATGGATCTTTCAGGTCAGGGTCAAAACAAGCTTCTTGTTGGTGCTCAGAATGTGAAGTATCTTCCACAACAATGGTGCATGTTTAATCCTGACGCTAAAGATCTCAGCAAACTCGCAGATAATATAAATTATGCTTGTACTTTCGGAGACTGCACTGCACTTGGGTATGGATCTTCCTGCAACAATTTAGATGCTAATGGGAATGCCTCATACGCGTTTAACATGTACTATCAAGTGCAGAATCAGGATGACATGGCCTGTAATTTTCAAGGGCTGGCCAAGCTTACTAACCAGAATCTTTCACAGGGGAACTGCAATTTTATTATTCAGATTGCTCCTTCATCGTCCCCTTCTTTGAGGTCCTCGCTAGTGGTTTGCGTTTTGATCACACTATCAGTGATTCTATTTTTGTAG 1434 0.4484 MGKFWILKWIVAVGIMSWDVEGLGVNWGTQATHKLPPDTVVQMLKDNGIQKVKLFDADESTMSALAGTNIEVMVAIPNNQLAPMNNYDRAKQWVRKNVTRYHFNGGVNIKYVAVGNEPFLKSYNNSFLNITLPALQNIQNALNEAGHGDTIKATVPLNADVYESPVNNPVPSAGRFRADINDLMTQISQFLNKNGAPFTVNIYPFLSLYGNDDFPFNYAFFDGVTNPINDNGIQYTNVFDANFDTLVSALTAVGLGTMPVLVGEVGWPTDGDKNANAGNAFRFYNGLLPRLAANKGTPRHPGYIEVYLFGLIDEDAKSVAPGNFERHWGIFRYDGQPKFPMDLSGQGQNKLLVGAQNVKYLPQQWCMFNPDAKDLSKLADNINYACTFGDCTALGYGSSCNNLDANGNASYAFNMYYQVQNQDDMACNFQGLAKLTNQNLSQGNCNFIIQIAPSSSPSLRSSLVVCVLITLSVILFL 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g3612 477 ProSitePatterns Glycosyl hydrolases family 17 signature. 258 271 IPR000490 GO:0004553|GO:0005975
Prci1g3612 477 Pfam X8 domain 364 433 IPR012946 -
Prci1g3612 477 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 23 436 IPR044965 GO:0004553|GO:0005975
Prci1g3612 477 FunFam Glucan endo-1,3-beta-glucosidase 8 360 456 - -
Prci1g3612 477 Gene3D - 360 457 - -
Prci1g3612 477 Pfam Glycosyl hydrolases family 17 23 342 IPR000490 GO:0004553|GO:0005975
Prci1g3612 477 SMART X8_cls 364 447 IPR012946 -
Prci1g3612 477 FunFam Glucan endo-1,3-beta-glucosidase 5 22 349 - -
Prci1g3612 477 SUPERFAMILY (Trans)glycosidases 23 342 IPR017853 -
Prci1g3612 477 Gene3D Glycosidases 22 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g3612 Prci-Chr1 52896813 52900318 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci1g3612 6 451 Miscellaneous Gene Families AT1G64760 76.233 0.0 716
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g3612 - - gmx:100815300 825.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3612 1 52896813 52900318 Prci3g2290 3 36592927 36596632 CCT
Prci1g3612 1 52896813 52900318 Prci1g3612 1 52896813 52900318 ECH