Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g2284 ATGGGTGCAAGTCGTAAACTTCAGGGTGAGATAGATCGTGTCCTGAAGAAGGTTCAAGAAGGCGTTGAAGTCTTCGATAGTATCTGGATTAAGGTTTACGATACTGACAACGCTAACCAGAAGGAGAAATTTGAGGCAGACCTGAAGAAGGAGATTAAGAAGCTTCAGAGGTACAGAGACCAGATTAAGACCTGGATTCAGTCTAGTGAGATCAAGGATAAGAAGGTCAGTGCCTCTTATGAGCAGGCCCTGGTGGATGCTCGCAAACACATTGAGCATGAAATGGAAAGATTTAAGATCTGTGAGAAGGAGACTAAGACCAAAGCTTTCTCCAAAGAAGGCTTGGGCCAACAGCCCAAAACTGATCCTAAGGAGAAGGCTAAATCGGAGACAAGGGATTGGTTGAACAATGTGGTTGGGGAATTGGAATCTCAGATTGATAACTTTGAAGCTGAGGTTGAAGGGATTTCTGTCAAAAAAGGGAAGAATAGGCCACCCAGACTGACACATCTAGAGACATCAATTACTCGGCACAAGGCTCACATAAAGAAATGTGAATTGCTTTTGAGGCTACTTGATAATGATGAGCTAAGTGCTGAGCAGGTTAATGATGTCAAAGATTTCTTGGAAGACTATGTAGAGCGTAACCAGGAGGACTTTGATGAATTCAGTGATGTTGATCAGCTATACAGTTCATTACCTCTGGATAAGGTGGAGTCTCTTGAAGATCTTGTTACAATTGGCCCCCCTGGTATTGCTAAGGGCACAACTGCTCTTAGCTTAAAGAATTCTGCGGTAGCATCAGCACCAGCGTCAACATCAGCATCTCAGACATCTGAGCAAGCTGATGATACAGCTTCCCAGGATAGCAATTCTGATATTGGTGCGAGAACTCCACCTTCTAAAAGTGTCGGAATTAATTCTGCTACTTCAACACCAGCTGGGAACCAAACAGCTCTTATTTCTATGAATATTTCGACTCATAACTTCTCCAGTGTACCACCCATTGCATCAGTTCTTCCTGGTTCAAATTCTGTTCGGAGTACCTTGGAGAATCCTACTGCTTTGAATTCTTCATCTTCTGTAAATCAGTCTAGCTCTGCAAAGGAAGAAGAAATTAGTAGCTTCCCTGGACGGAGACCATCTCCATCTCTTTCTGATGCTGTGCTTGTGAGGGACGTTAGCATAAACAGCCTGGCAAATCAAGCATCCTCCAGTATCCCTCTTGGTTCAGGCAACATTGTTTCCAGCATTGGGTCACTTGGTTCAGTCCCTTCAGCATCTGAAATAACAAAGAGAAACATATTGGGTGCTGATGATAGACTTGGAAGTGCTGCGATGGTGCAACCTCTTACATCTCCCCTTAGTAACAGAACAATCTTACCTCAGGCTGCAAAGGGTAATGATGGAAGTGCCTCATTCGACTCTGTAAATGTTAATGAGACTGTGGCTGTCCCTGGGAGAGTTTTTTCTTCTTCTGTGATGCCTGGCCTGCAATGGAGACCTGGAAGCCCCTTCCAGAACCAGAATGAGATGGGGCAGCTTCGAGGAAGAACTGAAATAACTCCTGATCAAAGAGAGAAATTTTTGCAGAAGTTTCAGCAAGTTCAGCAACAAGGGCACAATACCCTTCTTGGGATGCCTTCTCTTGGTGGAGGGAATCAAAAGCAATTTCCTGTGCAGCAGCAAAACCCTCTATTGCAGCAGTTTAGCTCCCAGGGCTCTTCTATTTCCTCTCAATCTGGTCTTGGACTGGGAACCCAGGCACCAGGTTTCAGTAGCATTCCATCTACCACACTTCAGCTGACACCTAATTCGATAAATTCCCCATCTAACCCGCAGCAGTTGATTGCAGGTGTTTCTAAAGATGCTGACATTGGAAATTCTGTGGTTGAAGATCAACAGCAACAACTGAATTTTCCTGATGAGGGAGTAACTGAATCTACTGCTAATGCTGGGCTTGGCAAGAATCTTATAAATGAAGATGATTTGAAATCCACATATGCTGCTGATTCTCCGGCAGGATTATATGGCTCTCTCCCAACAGAGCCTGCTCATACCTCCAGAGATACTGACTTGTCTCCTGGCCAGCCTTTACAATCCAATCAACTTACTGGTAACCTTGGTGTCATTGGAAGGAGAATTGGTGCTGACCTTGGAGCCATTGGTGATAACTTTAGTGGATCAAGTGTTAATTCTGGTGGAATGCGTGATCAGTTACATGATTTACAGATGCTTGGGGCCGCTTACTACAAACTTCCGCAACCTAAAGATTCAGAACGCCCAAGGACTTATACTCCTAGGCATCCAACAATAACACCTCCCAGTTATCCTCAAGTACAAGCGCCCATTGTCAATAATCCTGCTTTTTGGGAGAGAGTAGGGCTTGAACCATATGGAACTGATACCTTGTTTTTTGCATTCTATTATCAGCAGGATACATATCAACAATATTTGGCTGCAAAAGAGCTAAAGAAGCAGTCTTGGAGGTATCACAGAAAATATAATACTTGGTTTCAGCGACATGAAGAGCCAAAAGTTGCTACAGATGAATATGAGAAAGGAACATATGTATACTTTGATTTCTATGTTGCAAACGATGACCTACAACATGGGTGGTGTCAAAGAATTAAGACCGAGTTCACTTTTGAGTATAATTATCTTGAAGATGAGCTTATCATATAG 2685 0.4343 MGASRKLQGEIDRVLKKVQEGVEVFDSIWIKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALVDARKHIEHEMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVGELESQIDNFEAEVEGISVKKGKNRPPRLTHLETSITRHKAHIKKCELLLRLLDNDELSAEQVNDVKDFLEDYVERNQEDFDEFSDVDQLYSSLPLDKVESLEDLVTIGPPGIAKGTTALSLKNSAVASAPASTSASQTSEQADDTASQDSNSDIGARTPPSKSVGINSATSTPAGNQTALISMNISTHNFSSVPPIASVLPGSNSVRSTLENPTALNSSSSVNQSSSAKEEEISSFPGRRPSPSLSDAVLVRDVSINSLANQASSSIPLGSGNIVSSIGSLGSVPSASEITKRNILGADDRLGSAAMVQPLTSPLSNRTILPQAAKGNDGSASFDSVNVNETVAVPGRVFSSSVMPGLQWRPGSPFQNQNEMGQLRGRTEITPDQREKFLQKFQQVQQQGHNTLLGMPSLGGGNQKQFPVQQQNPLLQQFSSQGSSISSQSGLGLGTQAPGFSSIPSTTLQLTPNSINSPSNPQQLIAGVSKDADIGNSVVEDQQQQLNFPDEGVTESTANAGLGKNLINEDDLKSTYAADSPAGLYGSLPTEPAHTSRDTDLSPGQPLQSNQLTGNLGVIGRRIGADLGAIGDNFSGSSVNSGGMRDQLHDLQMLGAAYYKLPQPKDSERPRTYTPRHPTITPPSYPQVQAPIVNNPAFWERVGLEPYGTDTLFFAFYYQQDTYQQYLAAKELKKQSWRYHRKYNTWFQRHEEPKVATDEYEKGTYVYFDFYVANDDLQHGWCQRIKTEFTFEYNYLEDELII 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g2284 894 MobiDBLite consensus disorder prediction 675 705 - -
Prci3g2284 894 PIRSF NOT_su_3_5 1 894 IPR012270 GO:0006355|GO:0030015
Prci3g2284 894 MobiDBLite consensus disorder prediction 348 372 - -
Prci3g2284 894 Coils Coil 41 61 - -
Prci3g2284 894 Coils Coil 132 159 - -
Prci3g2284 894 MobiDBLite consensus disorder prediction 110 131 - -
Prci3g2284 894 MobiDBLite consensus disorder prediction 348 384 - -
Prci3g2284 894 MobiDBLite consensus disorder prediction 271 313 - -
Prci3g2284 894 FunFam CCR4-NOT transcription complex subunit 3 isoform X1 734 889 - -
Prci3g2284 894 MobiDBLite consensus disorder prediction 571 615 - -
Prci3g2284 894 MobiDBLite consensus disorder prediction 754 779 - -
Prci3g2284 894 PANTHER CCR4 NOT-RELATED 24 891 IPR040168 GO:0030015
Prci3g2284 894 Pfam NOT2 / NOT3 / NOT5 family 750 888 IPR007282 GO:0006355
Prci3g2284 894 Gene3D - 734 889 IPR038635 -
Prci3g2284 894 MobiDBLite consensus disorder prediction 684 705 - -
Prci3g2284 894 Pfam Not1 N-terminal domain, CCR4-Not complex component 4 236 IPR007207 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g2284 Prci-Chr3 36565280 36577054 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g2284 K12580 - gmx:100785965 1347.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g3614 1 52904096 52914738 Prci3g2284 3 36565280 36577054 CCT