Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0932 ATGCAGCAGCGATCATTACTAGTAGCCAAACAGTGCCCTAGAATTGCGCGAACAGCATGCGACGTGTTCCTGAACCACCGGAAGATTGACACGGCAAGAACCATCGTAGGGTTGCTGTATGAGAACCTGAAAATGATGAGAGTGAGAGCGTTCTTAGACACAATGAACATGAAACCAGGAGACAGATTGTTGGATCATATAGACAAGGCCATAGGTGAGTGTAAGGTCGGGGTCGCTGTCTTCTCCCCTGCTTACTGTGATTCCTTTTTCTGTCTGCATGAGCTTGCTCTTCTCGTAGAGTCCAAGAAAAGAGTGGTCCCTGTTTTCTACGACATCAAGCCCTCGCAGCTTCGGGTCAAGCCCACCAGAAGATTCACTCTCCAAGAACTCAGGAGGTTCAGTTTAGCACTCGAGGAGGCTAAGTGTATTCGAGGAATCTCCTTCGACTCCTTAAATGGGGATTGGTCGAAGCTGGTAAGGAATGCCTCGGACGCAGTGCTTATGAACTTGTTTGAGGTTGAGAGAGAAAGTGCATCTATGTCCGTTTAA 549 0.4809 MQQRSLLVAKQCPRIARTACDVFLNHRKIDTARTIVGLLYENLKMMRVRAFLDTMNMKPGDRLLDHIDKAIGECKVGVAVFSPAYCDSFFCLHELALLVESKKRVVPVFYDIKPSQLRVKPTRRFTLQELRRFSLALEEAKCIRGISFDSLNGDWSKLVRNASDAVLMNLFEVERESASMSV 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0932 182 Gene3D - 16 173 IPR035897 -
Prci3g0932 182 PANTHER COP1-INTERACTING PROTEIN-RELATED 16 176 - -
Prci3g0932 182 ProSiteProfiles TIR domain profile. 18 163 IPR000157 GO:0007165
Prci3g0932 182 SMART till_3 19 165 IPR000157 GO:0007165
Prci3g0932 182 Pfam TIR domain 21 118 IPR000157 GO:0007165
Prci3g0932 182 SUPERFAMILY Toll/Interleukin receptor TIR domain 19 119 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0932 Prci-Chr3 12037310 12038553 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0932 15 149 Miscellaneous Gene Families AT1G57670 27.333 3.07e-12 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0932 - - gmx:100798207 244.973
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g0932 3 12037310 12038553 Prci3g0931 3 11974449 11975193 CCT