Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0931 ATGCAGAGTCTTCCTGCCAAGATCTGTCGCAACGTCCTACGTCCGGCATGCGACGTTTTTATCAACCACCGTGGCATTGACACCAAGAAGAACGTCGCCGGACTGATTTACCACCACCTCTCCGGCATGGGTGTTCCGTCGTTTCTCGATAGCATGAACATGAAGCCCGGCGATCGGCTGTTTGATCACATCAACAAGGCCATTCTCGGGTGTAAGGTCGGCGTCGCCGTCTTCAGCCCTCGGTACTGCGACTCTTACTTCTGCCTCCACGAGCTCGCTCTTCTCATGGAATCAAGGAAACGGGTGGTTCCGATCTTCTTTGACGTCAAGCCTTCACAGCTTCAAGTCAGGGACAATGGGACTTGTTCGGCGAAGGAGCTTCAGAGGTTCAGATACGCACTTGAAGAAGCCAAATACACTGTGGGATTGACCTTCGACCCTGTCACAGGGGACTGGTCGGAATTACTGAAGGATGCTTCCCAAGCTGTGGTTACCAACTTGCTGGAGGTTGAAGACGAACGGAAACGACGCCGTTAG 537 0.5326 MQSLPAKICRNVLRPACDVFINHRGIDTKKNVAGLIYHHLSGMGVPSFLDSMNMKPGDRLFDHINKAILGCKVGVAVFSPRYCDSYFCLHELALLMESRKRVVPIFFDVKPSQLQVRDNGTCSAKELQRFRYALEEAKYTVGLTFDPVTGDWSELLKDASQAVVTNLLEVEDERKRRR 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0931 178 ProSiteProfiles TIR domain profile. 15 134 IPR000157 GO:0007165
Prci3g0931 178 SUPERFAMILY Toll/Interleukin receptor TIR domain 17 141 IPR035897 -
Prci3g0931 178 Pfam TIR domain 19 114 IPR000157 GO:0007165
Prci3g0931 178 Gene3D - 14 171 IPR035897 -
Prci3g0931 178 SMART till_3 16 149 IPR000157 GO:0007165
Prci3g0931 178 PANTHER COP1-INTERACTING PROTEIN-RELATED 16 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0931 Prci-Chr3 11974449 11975193 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0931 14 146 Miscellaneous Gene Families AT1G57670 27.891 6.17e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0931 - - gmx:100798207 294.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g0932 3 12037310 12038553 Prci3g0931 3 11974449 11975193 CCT
Prci3g0931 3 11974449 11975193 Prci3g0931 3 11974449 11975193 ECH