Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g1016 ATGTCAAAAGTCCTCGGATTTACTGGAATTGATGATTTTTTCCCCGGGGGGTCAATATATGCTAACCCCAAGGAGCCCAGTCTCCTCTTGTCTCTTGGCCGTCATGTTGATGTATACTTTCCACCTCAAAAGAGATCACGTATTAGTGCTCCACTGGAGAGATCACAAATCAATGGTCCATTTCTTTTCGGTGGAGAATGGTTTGAGGCGGAAAAGAAGCTGCAAACATCCATTGAAGACTTGCCAGATGAATGCCTCTTTGAGATCTTCAGAAGGTTGCCCGGAGGTCAAGAGAGGAGTTCATGTGCCTGTGTTTCCAAGCGCTGGCTTTGGCTTCTAGGCTATATTTGCAAGGATGAAATTTGCAGCAACAAAAAGACAAGTTATGAGAGTGATGTTAATGGAGAGGAGGCTGATGTTGAGGAACTGGGGGGCGGTGGTTACCTCTCCCGTGACTTGGAAGGAAAGAAAGCAAATGATGTTAGACTTGCTGCTATTGCCGTTGGGACTGCTTCTCGTGGTGGATTGGGAAAGCTTTCAATCCGTGGAGACAATTCAGGTTGTGCAGTGACTAATGTTGGTCTCAAGGCTGTTGCCCGGGGGTGCCCTTCTTTAAAGGCTCTTTCTCTTTGGAGTGTTACTACCATAGATGATGAAGGCCTGATTGAGATTGCAAGTGGATGTCCCCAGCTCAAGAAGCTTGACCTTTGCTATTGTCCCACAATATCTGATAAGGCTTTGATTGCAGTTGCAAAGAACTGCCCTAACCTGACTGAGTTATCAATTGAATCATGTCCCAGAATTGGTAATGAAGGTCTACAAGCTGTTGGGCAGTTTAGCACTAGCCTAAGGTCCTTATCAATCAAGAATTGCACCTGTGTTGGTGATCAGGGAATTGCTAGCCTTTTTTCTTCAGCTTCTTTTTCTCTAACAAAGGTAAAGCTTGAGGCGCTGCCAATTTCTGACCTTTCTTTAGCTGTTATTGGTCATTATGGTAAAGCAGTTACAGATCTTGCCTTTAAATTCCTCCCTAATGTCAGTGAGAAAGGGTTTTGGCTCATGGGTAACGGCCATGGGTTGCAGAAGTTAAATTCACTCTCAATTGCATCCTGTCAAGGAGTAACAGATATTGGGCTTGATGCTTTAGGTAGGGGTTGCCCAAATCTCAAACACCTGTATCTCTGTAAAAGTGCATTCCTATCTGACTATGGGCTGGCCTCATTTTCCAAAGCTGCTTTATCACTGGAGAGCCTAAAATTGGAGGAGTGCGACAGAATCACCCAGCTTGGGATTTTTGGTGTCATTTTCAATTGTTGTGCCGAATTGAAGGCCCTTGCACTTACAAGCTGCTTTGGGATTAAGGATCAGAATTTGGTGTTGCCTTCTGTATCTCCTTGCCAATCACTGCAGTCTCTATCAATTAGAAACTGTCCGGGATTTGGTGATGCTACAATGGCTTTACTGGGAAAGCTTTGCCCTCAGCTGCAGTATGTTGAATTGAGCAAACTTGAGGGAGTGACTGATGCGGGGTTCCTTCCAGTGCTTTTGAATTCCGAGGCTGGTCTGGTTAAAGTTAATCTCAGTCACTGCATAAATCTGACGGATAAAGTAGTTTCCTCCATCGCCAATAAGCATGGCTTGACTCTTGAGGTCCTAAATCTTGATGGTTGTAAAAAGGTCAGCGATGTTAGCTTGATGGCAATTGCTGAAAACTGCCCATTGATCTGGGATCTGGATGTCTCTGAGTCTGCAATTACTGATGCTGGTGTCACAGCCTTGGCAGGTGGTGGCATGTTCCATTTGCAGATCCTTTCCTTGTCAGGCTGCTCTCTTGTTTCAAACAAGAGCCTGCCTGCTTTGCGAAATTTGGGTGAGACCCTTTTGGGATTAAATATCCGCAACTGCAAGGCAATTAACGGCCGTACTATTGGGAAGCTTGTGGAACGGCTCTGGAGGTGTGACATCCTTTCATGA 1974 0.4524 MSKVLGFTGIDDFFPGGSIYANPKEPSLLLSLGRHVDVYFPPQKRSRISAPLERSQINGPFLFGGEWFEAEKKLQTSIEDLPDECLFEIFRRLPGGQERSSCACVSKRWLWLLGYICKDEICSNKKTSYESDVNGEEADVEELGGGGYLSRDLEGKKANDVRLAAIAVGTASRGGLGKLSIRGDNSGCAVTNVGLKAVARGCPSLKALSLWSVTTIDDEGLIEIASGCPQLKKLDLCYCPTISDKALIAVAKNCPNLTELSIESCPRIGNEGLQAVGQFSTSLRSLSIKNCTCVGDQGIASLFSSASFSLTKVKLEALPISDLSLAVIGHYGKAVTDLAFKFLPNVSEKGFWLMGNGHGLQKLNSLSIASCQGVTDIGLDALGRGCPNLKHLYLCKSAFLSDYGLASFSKAALSLESLKLEECDRITQLGIFGVIFNCCAELKALALTSCFGIKDQNLVLPSVSPCQSLQSLSIRNCPGFGDATMALLGKLCPQLQYVELSKLEGVTDAGFLPVLLNSEAGLVKVNLSHCINLTDKVVSSIANKHGLTLEVLNLDGCKKVSDVSLMAIAENCPLIWDLDVSESAITDAGVTALAGGGMFHLQILSLSGCSLVSNKSLPALRNLGETLLGLNIRNCKAINGRTIGKLVERLWRCDILS 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g1016 657 FunFam EIN3-binding F-box protein 1 518 655 - -
Prci2g1016 657 Gene3D - 71 122 - -
Prci2g1016 657 FunFam EIN3-binding F-box protein 1 267 457 - -
Prci2g1016 657 PANTHER UNCHARACTERIZED 315 535 - -
Prci2g1016 657 SUPERFAMILY F-box domain 76 112 IPR036047 GO:0005515
Prci2g1016 657 SMART LRR_CC_2 228 253 IPR006553 -
Prci2g1016 657 SMART LRR_CC_2 466 491 IPR006553 -
Prci2g1016 657 SMART LRR_CC_2 572 596 IPR006553 -
Prci2g1016 657 SMART LRR_CC_2 280 305 IPR006553 -
Prci2g1016 657 SMART LRR_CC_2 202 227 IPR006553 -
Prci2g1016 657 SMART LRR_CC_2 546 571 IPR006553 -
Prci2g1016 657 SMART LRR_CC_2 598 623 IPR006553 -
Prci2g1016 657 SMART LRR_CC_2 386 411 IPR006553 -
Prci2g1016 657 SMART LRR_CC_2 519 544 IPR006553 -
Prci2g1016 657 SMART LRR_CC_2 412 437 IPR006553 -
Prci2g1016 657 SMART LRR_CC_2 254 279 IPR006553 -
Prci2g1016 657 SMART LRR_CC_2 360 385 IPR006553 -
Prci2g1016 657 SMART LRR_CC_2 439 464 IPR006553 -
Prci2g1016 657 SMART LRR_CC_2 492 517 IPR006553 -
Prci2g1016 657 FunFam EIN3-binding F-box protein 1 77 113 - -
Prci2g1016 657 FunFam EIN3-binding F-box protein 1 148 266 - -
Prci2g1016 657 Gene3D Ribonuclease Inhibitor 161 252 IPR032675 -
Prci2g1016 657 Gene3D Ribonuclease Inhibitor 457 516 IPR032675 -
Prci2g1016 657 Gene3D Ribonuclease Inhibitor 579 655 IPR032675 -
Prci2g1016 657 Gene3D Ribonuclease Inhibitor 517 578 IPR032675 -
Prci2g1016 657 SUPERFAMILY RNI-like 356 616 - -
Prci2g1016 657 Pfam F-box-like 78 109 IPR001810 GO:0005515
Prci2g1016 657 Gene3D Ribonuclease Inhibitor 253 452 IPR032675 -
Prci2g1016 657 Pfam Leucine Rich repeat 548 569 IPR001611 GO:0005515
Prci2g1016 657 Pfam Leucine Rich repeat 253 276 IPR001611 GO:0005515
Prci2g1016 657 Pfam Leucine Rich repeat 361 382 IPR001611 GO:0005515
Prci2g1016 657 Pfam Leucine Rich repeat 280 302 IPR001611 GO:0005515
Prci2g1016 657 CDD F-box_AtTIR1-like 78 110 - -
Prci2g1016 657 SUPERFAMILY RNI-like 186 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g1016 Prci-Chr2 7493181 7496564 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g1016 K14515 - gmx:100820247 911.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g1016 2 7493181 7496564 Prci15g1013 15 6280442 6284187 CCT
Prci2g1016 2 7493181 7496564 Prci2g1016 2 7493181 7496564 ECH