Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0963 ATGCTGAAGCAATTTCTCAGCAGGCTTCCTCGGAAGTCATCCAAATCCGACTCCAACGAGTCAAATCGTGGTGATTCTTCTCATTCGAGCCCCTCGCTGGACACTTCAGCACGCATTTCCGGGAGGAGTAATCGATCAAACGGTGGGAGTTCTTCCGGTCGATACAACACTGCCAAACGCACTTCTTCGTCGGCAGTTTTTCCAGCGAGCATCGTGTCTGGGATCGAACCCTTAGTTCCTTTCAAAGATGTACCCAATGCGGAGAAGATGAACCTGTTTGTGAGCAAATTGAGCCTTTGTTGTGTTACTTTTGATTTTACAGACCCTGTTACAAATACCGTTGAGAAAGATGTCAAGAGGAAAACTTTGCTCGAACTTGTCGATTTTGTGGATTCTGGGTCGATGAAGTTTAGTGAACATGCTATCTTTGCTATGTGCAAAATGTGTGCCATTAATCTCTTTAGAGTTTTCCCGCCTAATTGTCGGTCAAATGGGAAGCGTAGTGCGGGTGGCGAGAATGATGATGATGAGCCAACATTCGATCCTGCTTGGCCACATTTACAGATTTTGTATGACTTGCTACTTAAATTTATTACTTCTTCTTGCCTTGATGCTAAGGTAGCGAAGAAATACTTCGACCATTCATTTATTTCGAAGTTGCTTGACTTGTTCGACTCAGAGGATCCAAGGGAAAGAGATTGCTTAAAGACAATTCTGCATAGGGTTTATGGGAAGTTCATGGTGCATAGGCCCTATATTCGAAAATCTTTTAACAATATCTTCTATCGGTTTGTGTTTGAGACGGAAAAACACAATGGAATTTCTGAGTTGTTGGAGATTTTTGGGAGCATAATTAGTGGCTTTGCTTTACCTTTGAAAGAGGAACACAAGATTTTCTTGTGGAGGGTTTTGATCCCCTTGCACAAGCCAAAATCCGTGGGGCTTTATTTTCAGCAATTGTCCTACTGCGTCACACAGTTTATGGAGAAGGAGCCGAAGTTAGCAAGCACTGTGATAAGAGGTTTATTAAAATATTGGCCAATAACAAATAGTCAGAAAGAGGTGATGTTCTTGAGCGAATTGGAAGAGATTTTGGAGGCAATCAACATGATCGAGTTCCAAAGGGTCATGGTTCCATTGTTTTGGCGGATTGGGTGCTGTATTAACAGCTTGCACTTTCAGGTAGCTGAAAGAGCCCTTTTCTTATGGAATAACGACCATATCATCAACTTGATTGCACATAATCGTCAGGTGATCCTTCCTATCATATTTCCAGCTTTAGAGAGGAACTCTCAGAACCACTGGAATCATGCAGTGCTCAATTTAACCCTTAATATTAGAAAGATGTTCTTGGAGATGGATGAGAAGCTCTTCATGTCCTGTCATTCTAGCTTTAAGGAGGAAGAGGCAACTCTAAGCTTAGCAGCTGAGCAGCGAAAGGAAGCATGGAAAAGATTAGAGCATGCAGCCAGTCTGCAGCCTGTAATTGGAAATACTGCAGTGTTGGTCTCTCCTTAA 1518 0.4249 MLKQFLSRLPRKSSKSDSNESNRGDSSHSSPSLDTSARISGRSNRSNGGSSSGRYNTAKRTSSSAVFPASIVSGIEPLVPFKDVPNAEKMNLFVSKLSLCCVTFDFTDPVTNTVEKDVKRKTLLELVDFVDSGSMKFSEHAIFAMCKMCAINLFRVFPPNCRSNGKRSAGGENDDDEPTFDPAWPHLQILYDLLLKFITSSCLDAKVAKKYFDHSFISKLLDLFDSEDPRERDCLKTILHRVYGKFMVHRPYIRKSFNNIFYRFVFETEKHNGISELLEIFGSIISGFALPLKEEHKIFLWRVLIPLHKPKSVGLYFQQLSYCVTQFMEKEPKLASTVIRGLLKYWPITNSQKEVMFLSELEEILEAINMIEFQRVMVPLFWRIGCCINSLHFQVAERALFLWNNDHIINLIAHNRQVILPIIFPALERNSQNHWNHAVLNLTLNIRKMFLEMDEKLFMSCHSSFKEEEATLSLAAEQRKEAWKRLEHAASLQPVIGNTAVLVSP 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0963 505 SUPERFAMILY ARM repeat 91 486 IPR016024 -
Prci2g0963 505 PIRSF PP2A_B56 3 502 IPR002554 GO:0000159|GO:0007165|GO:0019888
Prci2g0963 505 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 80 490 IPR002554 GO:0000159|GO:0007165|GO:0019888
Prci2g0963 505 Gene3D - 85 489 IPR011989 -
Prci2g0963 505 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 491 IPR002554 GO:0000159|GO:0007165|GO:0019888
Prci2g0963 505 MobiDBLite consensus disorder prediction 23 57 - -
Prci2g0963 505 MobiDBLite consensus disorder prediction 1 57 - -
Prci2g0963 505 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 85 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0963 Prci-Chr2 7116413 7120079 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0963 K11584 - qsa:O6P43_015634 857.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0963 2 7116413 7120079 Prci15g0954 15 6033157 6036695 CCT