Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0954 ATGCTCAAGCAATTCTTCAGCAAGCTTCCTCGGAAGTCATCCAAATCCGATGTGGAGGAGCCATATCGGGACTCAGTGGCCGCTTCGCCGCGCGTCACCGGGAGGGCTAATCGGCAGAACGGTGGGAGTTCTTCCACTCGATCCAATGCTGTGAAACGTACTTCTTCGTCGGCGGTTTTCCCCGCGAGCATCGTGTCTGGGATCGAACCCTTGGTGCCATTCAAAGATGTGCCAAATGCAGAGAAGATGAACCTATTTGTGAGTAAGTTGAGCCTTTGTTGCATGACTTTCGATTTCACTGACCCTGGCAAGAATGTCGTGGAAAAAGATGTCAAAAGGCGAACATTGCTCGAGCTCGTCGATTTTGTCGCTTCTGGGTCGACTAAATTCAGTGAACCTGCTATTGTTGCTATGAGTAGAATGTGTGCTATTAATCTCTTTAGGGCTTTCTCGCCACCGTATCGGTCTCATGGGAGTGGTGCTGGTGGCGAGAATGACGATGATGAACCAGTATTTGACCCTGCTTGGCCACATTTACAGCTTGTGTATGAATCGCTGCTTAGTTTTATTAATTCTCCGTGTCTTGATGCTAAGGTGGCGAAAAAGTATATTGATCATTCATTTATCTCGAGATTGCTTGAATTGTTTGATTCAGAGGATCCAAGAGAAAGAGACTGCTTGAAGACTATTCTGCACAGGGTTTATGGAAAGTTCATGGTGCATAGGCCCTATATTCGAAAATCTATTAACAACATATTTTACCGATTTGTGTATGAGTCTGAGAAGCACAATGGCATTGCTGAGTTATTGGAGATTTTTGGGAGCATAATTTGTGGGTTTGCCTTGCCTTTGAAAGAGGAGCACAAAATCTTTTTATGGAGAGTTTTGATCCCCTTGCACAAGCCAAAATCCATGGGTGCTTATTTCCAGCAATTGTCCAATTGCGTTATACAGTTCGTGGAGAAGGAGCCGAAGCTGGCCAGCACTGTTATAAGGGGTTTGTTAAAATATTGGCCAATAACAAATAGTCAGAAGGAGGTCATGTTCTTGGGCGAAATGGAAGAGATTTTGGAAGTAATCAACATGGTAGAGTTCCAGAGGGTTATGGTCCCATTGTTTTGGCGGATTGGTTGCTGCATTAACAGCTTACACTTTCAGGTAGCTGAAAGGGCCCTTTTCTTATGGAACAATGATCATATTGTGAACTTGATTGCACATAACCGTCAGGTGATCCTGCCCATCATATTTCCAGCACTAGAGAGAAACTCTCAGAGCCACTGGAGCCAACCTGTGTTCAATTTAACCCTTAATATTAGAAAGATGTTCATAGAGATGGATGACAAGCTCTTTCTGTCGTGCCATTCTCACTTCAAGGAGGAAGCAGCCTTCCTAATCTCAGCGGCCGAGAAGCGAAAAGAAGCGTGGGAACAACTAGAGCAAGCAGCCAGTCTCCGGCCAGTGATCGGGAATACAGCTGTTTTAGTGTGTCCTTTGACAACCTAA 1503 0.4498 MLKQFFSKLPRKSSKSDVEEPYRDSVAASPRVTGRANRQNGGSSSTRSNAVKRTSSSAVFPASIVSGIEPLVPFKDVPNAEKMNLFVSKLSLCCMTFDFTDPGKNVVEKDVKRRTLLELVDFVASGSTKFSEPAIVAMSRMCAINLFRAFSPPYRSHGSGAGGENDDDEPVFDPAWPHLQLVYESLLSFINSPCLDAKVAKKYIDHSFISRLLELFDSEDPRERDCLKTILHRVYGKFMVHRPYIRKSINNIFYRFVYESEKHNGIAELLEIFGSIICGFALPLKEEHKIFLWRVLIPLHKPKSMGAYFQQLSNCVIQFVEKEPKLASTVIRGLLKYWPITNSQKEVMFLGEMEEILEVINMVEFQRVMVPLFWRIGCCINSLHFQVAERALFLWNNDHIVNLIAHNRQVILPIIFPALERNSQSHWSQPVFNLTLNIRKMFIEMDDKLFLSCHSHFKEEAAFLISAAEKRKEAWEQLEQAASLRPVIGNTAVLVCPLTT 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0954 500 Gene3D - 78 481 IPR011989 -
Prci15g0954 500 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 73 482 IPR002554 GO:0000159|GO:0007165|GO:0019888
Prci15g0954 500 MobiDBLite consensus disorder prediction 1 52 - -
Prci15g0954 500 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 78 481 - -
Prci15g0954 500 PIRSF PP2A_B56 5 494 IPR002554 GO:0000159|GO:0007165|GO:0019888
Prci15g0954 500 MobiDBLite consensus disorder prediction 10 24 - -
Prci15g0954 500 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 483 IPR002554 GO:0000159|GO:0007165|GO:0019888
Prci15g0954 500 SUPERFAMILY ARM repeat 84 477 IPR016024 -
Prci15g0954 500 MobiDBLite consensus disorder prediction 32 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0954 Prci-Chr15 6033157 6036695 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0954 K11584 - qsa:O6P43_015634 832.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0963 2 7116413 7120079 Prci15g0954 15 6033157 6036695 CCT
Prci15g0954 15 6033157 6036695 Prci15g0954 15 6033157 6036695 ECH