Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0935 ATGACATGCTATATACACTGGCTACCAATATGCAAGCTGCTGAAAAATGGGTTTCGAAAAATGTTTCTGCCCATCTCTCTTCCGGCGTTGACATCAGTGGGGAATGAGCCTTTCTTGTCAACTTTCAATGGCACCTTTGAAGCCACAACTCTTCCATCTCTTAAAAATATACAGACAGCACTCACAAGAGCAGGTTTGAGTAACCGCATTAAAGTCACCGTCCCTCTAAATGCAGATGTGTATTTGAGTTCATCTGAGAATCCTTCTGATGGTGATTTCCGGCCGAACATCCATGAACTGATGCTGCAGATTGTCAAGTTCTTGAGTGACAATGGAGCTCCTTTCACTGTCAACATCTACCCATTCATCAGTCTCTACGCAGACCCCAATTTCCCAGTTGACTATGCCTTCTTTGACGGTTATCAGAGTTCTATAAACGACAATGGCAAAGTCTATGACAATGTCTTTGATGCTAACCACGACACACTGGTCTGGGCATTGCAGAAGAATGGCTTTGGAAACTTGCCTATTATCGTGGGAGAAATTGGGTGGCCAACCGATGGAGACCTACACGCGAATCTTCAGTATGCACAGCGTTTCAACCAAGGCTTCTTGTCTCGCTACCTCACTGGAAAAGGGACTCCAATGAGGCCTGGTCCTTTAGATGCATACTTGTTTAGCCTAATCGATGAAGATGCAAAGAGCATTCAGCCAGGTAACTTTGAACGCCATTGGGGGTTGTTTTACTTTGATGGGCAACCCAAGTACCAACTTAATCTTGGGTCAACAAGAACAAATGGTTTAGTGGGTGCAAGTGGGGTTCATCATCTGGCTAAAAGATGGTGTATTTTGAAACCATCTGCGAATCTGAATGATGATCAATTGGCTCCAAGTGTGGCTTATGCTTGTCAAAATGCAGATTGTACGAGTCTTGGCTATGGGACTTCATGTGGGAGCTTAGATGTTAAGGGTAATATTTCTTATGCTTTTAACAGCTACTTTCAAATAAATGACCAGATGGATAGTGCCTGCAAGTTCCCGGGTCTTTCTGTTGTCACTGATAAAGATCCTTCCGTTGGGAATTGCAAGTTCAGGGTCATGATCGAGTCAGGTTCTGCTGAGGGACTTGCATCTCTTCGAGTAGTGCTCTTTGTAATTTTTCTTTTCTCTATTCTCTAA 1179 0.436 MTCYIHWLPICKLLKNGFRKMFLPISLPALTSVGNEPFLSTFNGTFEATTLPSLKNIQTALTRAGLSNRIKVTVPLNADVYLSSSENPSDGDFRPNIHELMLQIVKFLSDNGAPFTVNIYPFISLYADPNFPVDYAFFDGYQSSINDNGKVYDNVFDANHDTLVWALQKNGFGNLPIIVGEIGWPTDGDLHANLQYAQRFNQGFLSRYLTGKGTPMRPGPLDAYLFSLIDEDAKSIQPGNFERHWGLFYFDGQPKYQLNLGSTRTNGLVGASGVHHLAKRWCILKPSANLNDDQLAPSVAYACQNADCTSLGYGTSCGSLDVKGNISYAFNSYFQINDQMDSACKFPGLSVVTDKDPSVGNCKFRVMIESGSAEGLASLRVVLFVIFLFSIL 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0935 392 SUPERFAMILY (Trans)glycosidases 24 259 IPR017853 -
Prci2g0935 392 Pfam X8 domain 281 349 IPR012946 -
Prci2g0935 392 Gene3D - 276 372 - -
Prci2g0935 392 SMART X8_cls 280 364 IPR012946 -
Prci2g0935 392 ProSitePatterns Glycosyl hydrolases family 17 signature. 175 188 IPR000490 GO:0004553|GO:0005975
Prci2g0935 392 Gene3D Glycosidases 22 267 - -
Prci2g0935 392 Pfam Glycosyl hydrolases family 17 30 259 IPR000490 GO:0004553|GO:0005975
Prci2g0935 392 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 32 353 IPR044965 GO:0004553|GO:0005975
Prci2g0935 392 FunFam Glucan endo-1,3-beta-glucosidase 8 276 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0935 Prci-Chr2 6818423 6821911 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci2g0935 31 391 Glycoside Hydrolase AT4G31140 69.231 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0935 K19893 - gmx:100796552 648.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0923 15 5904925 5907786 Prci2g0935 2 6818423 6821911 CCT