Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0923 ATGATGAGAGGAGTGAAATTTAGCGGGGTTATTGTCCGTTTGTTGTGTAGTGTGGTGTTGGTGGGGATAGTGAGAGGGATCGGGGTGAATTGGGGGACACAATCAACACACCCTTTGCCAGCACCAACAGTGATGAAAATGCTCAAAGACAACGGAATTCAGAAGGTGAAGCTGTTTGACGCTGACCCAAATACTCTGGATGCTCTCAAGAAGTCAGGGATTCAAGTCATGGTGGGCATTCCAAACGACATGCTCGCTTCACTAGCCAACAACATGCAAGCTGCTGAAAAGTGGGTCTCCAAGAACGTTTCGTCTCACGTCTCTTCTGGTGGAGTAGACATCAGGTATGTTGCCGTGGGAAATGAACCTTTCTTGTCAACATATAACGGCACTTTTGTGTCAACAACTCTTCCAGCTCTTCAAAACGTCCAATCTGCTCTCATCAAATCCGGTTTGGCCAATCAGGTCAAAGTCACTGTCCCTCTGAACGCCGACGTGTATCAGAGTTCATCCGACAAGCCCTCCGATGGGAACTTCCGGCCAGACATCCACGACCTTATGCTGCAGATTGTCAAGTTCTTGAGTGACAATGCAGCCCCATTCACAGTCAACATCTACCCATTCATCAGCCTCTACAAAGACTCAAACTTTCCAGTTGACTACGCCTTCTTCAACGGCTACCAGACCCCCATAAATGACAACGGAAAGATCTATGACAATGTGTTCGATGCCAACCATGACACGCTTGTTTGGGCATTGCAGAAAAATGGGTTCGGAAACTTACCCATAATTGTGGGAGAGATTGGCTGGCCTACGGACGGAGACAGAAATGCAAATCTTCAGTATGCTCAGCGTTTCAACCAAGGTTTCATGTCTCGCTACATTGCAGGAAAAGGGACTCCAATGAGACCTGGCCCTGTAGACGCTTACTTGTTCAGCCTCATAGATGAAGATGATAAGAGCATTCAACCTGGTAATTTTGAACGTCACTGGGGTCTGTTTTACTTCGATGGTCAACCTAAATACCAGCTTAACATTGGATCGTCGGCTAAAGGTTTGGTGGCTGCTAGGGGCGTGCATTATCTGGAGAAGAAGTGGTGTGTGTTGAAGCCTTCAGCGAACCTTAATGATGAGCAACTGGCACCGAGTGTGGCTTATGCTTGTGAGAGAGCAGATTGCACTAGTCTTGGATATGGAACTTCTTGTGGGAATTTAGATACAAAGGGTAATATCTCTTATGCATTTAACAGTTACTACCAGGTACATGACCAGCTTGACAGCGCTTGCAAGTTCCCAGGCCTTTCCGTCATCACCAATCAAGATCCTTCAGTTGGAGATTGCAAGTTCAGAATCATGATCCAGACAGATTCTGCTAACCCGGATAGGAGGATTGGATCTTTCACGATAGTGCTGTTTTTATATTTGCTTTTTGCTATCCTATAA 1443 0.4622 MMRGVKFSGVIVRLLCSVVLVGIVRGIGVNWGTQSTHPLPAPTVMKMLKDNGIQKVKLFDADPNTLDALKKSGIQVMVGIPNDMLASLANNMQAAEKWVSKNVSSHVSSGGVDIRYVAVGNEPFLSTYNGTFVSTTLPALQNVQSALIKSGLANQVKVTVPLNADVYQSSSDKPSDGNFRPDIHDLMLQIVKFLSDNAAPFTVNIYPFISLYKDSNFPVDYAFFNGYQTPINDNGKIYDNVFDANHDTLVWALQKNGFGNLPIIVGEIGWPTDGDRNANLQYAQRFNQGFMSRYIAGKGTPMRPGPVDAYLFSLIDEDDKSIQPGNFERHWGLFYFDGQPKYQLNIGSSAKGLVAARGVHYLEKKWCVLKPSANLNDEQLAPSVAYACERADCTSLGYGTSCGNLDTKGNISYAFNSYYQVHDQLDSACKFPGLSVITNQDPSVGDCKFRIMIQTDSANPDRRIGSFTIVLFLYLLFAIL 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0923 480 Gene3D Glycosidases 25 352 - -
Prci15g0923 480 FunFam Glucan endo-1,3-beta-glucosidase 8 361 458 - -
Prci15g0923 480 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 20 438 IPR044965 GO:0004553|GO:0005975
Prci15g0923 480 Pfam X8 domain 365 434 IPR012946 -
Prci15g0923 480 SUPERFAMILY (Trans)glycosidases 27 345 IPR017853 -
Prci15g0923 480 SMART X8_cls 365 449 IPR012946 -
Prci15g0923 480 FunFam Glucan endo-1,3-beta-glucosidase 5 26 352 - -
Prci15g0923 480 Gene3D - 361 459 - -
Prci15g0923 480 Pfam Glycosyl hydrolases family 17 27 345 IPR000490 GO:0004553|GO:0005975
Prci15g0923 480 ProSitePatterns Glycosyl hydrolases family 17 signature. 261 274 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0923 Prci-Chr15 5904925 5907786 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci15g0923 1 479 Glycoside Hydrolase AT4G31140 69.102 0.0 703
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0923 K19893 - gmx:100796552 802.357
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci15g0923 15 5904925 5907786 Prci2g0935 2 6818423 6821911 CCT