Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci2g0537 ATGAACTGGGCTGTGGTTTTGTGGGGAGGCTTTCCCTTCTCAGAAGCTACCTGCTGCGAAAATCATCCCTGCGTTCATTATCCATTAAATCTACCCACAATATACACAGCAAGGAGAGCAAAAACGGTTACAAAAAGCCTCCGAATCATGAATCCAAGGGAGCGCCAAATATTCCCATCGAGTCCCACAAACCAGATTCGGATCAGAAAACCAAGAAAGAGCACCTCCGGTCATCACAACAGTCAAAACCGGAGGCCTTCAGATGCTGCTAGAAGCTCAACGTCTTCCTCAGGTAATTCAACCAGCACGAAGAATGACGAGAACAAATTACAGAGAGAGCCCGCCGGGAGTTCTCTGGAGCTTGCTAGGATAAGCAATAGTCACCAGCGAGAGAACGAGAATAAAGCCACGGTTAACTTGAAACTCACTGGGAATTTGCTCACAAATAACAGCCCCAGAACTAGCGTTACAAAGAAAGTGGAATCCGTTCCCAAGAGTAAAGAGTTGAATTCCGTGACCAGTTCTCACAATAACGCCGGGATGGGGAACATCATGAGGAAGAACACCGATGAGCTCGCGCAACTGCGGAGACAGAGGATCCGAATAGACCCTGAGGTGTTGAAGGCCGAGGGAAATGAAGCCTACAAGCAGGGGAAATTCGAAGAAGCTCTGAGTCTGTACGACCGAGCCATTCTTCTGGATTCAAGTAAGCCAACTTATCATTGCAATAAGAGTGCGGCTCTGATGGGCTTAGGCCGCCTTCCGGAAGCAATGGTTGAATGTGAGGAAGCTATTCGCCTGGAACCTTCTTATACAAGAGCTCACCACCGTTTGGCGGCTATATATCTCAGACTCGGAGAAGCAGAAAAGGCCATGCACTGCAATAACTCAACTCCATACGGGGACTCCGTACTCGCATTCCAAGCTCAGGCCCTTCAAAAGCACGTTAAAAAATGCCTTGAAGCTCGTAAAGTGAACGAGTGGAACACTATACTAAAGGAAACACAATATGCAATATCATTATGTGCTGATTCAGCTCCGCAGGTCTATGCTTTGCTAACAGAAGCCTTACTGAAGCTCCTGAAACATGGAGAGGCATCTTCTACCTACGAAAAACTGCCCAAATTTGAACTTGATTGGTCTATCAAGATTTTTGGCGTACCGCATACTGCATATTTGTTGATAGTAGGCGCTCAGGTTCAATTGGCAGCGGGCAGGTTTGACGATGCCGTGACAGCTGCTCAGCAAGCAGCTGAACTTGATCCAACCAACAAAGAGGTGAATGCAGCGGTAAGAAAGACGAGAGCAGTGAGATCAGCCAGAATGAGTGGAAATATACTGTTCAAGGCATCCAAATTTATGGAAGCGTGTGGGTTTTACAGCGAAGGGCTAGAGCATGATCCGTTCAACTCAGTGCTGCTATGCAACAGAGCAGCTTGTCGTTCTAAGCTCGGTCAGTTTGAGAAAGCAATTGAAGATTGTAGTGCAGCCCTTGCTGTTCAGCCTTATTACAGCAAGGCAAGGTTACGTAGGGCAAATTGCAACGCCAAGTTGGAAAGATGGGGGGCTGCCATTCAAGACTACGAAATGCTGATGAGGGAAAAGCCAGGGGATGAGGAAGTGGCAAGGGCTCTGTTTGAGGCACAACTTCAACTCAAGATGCTACGAGGAGAAGATATTAAAGACTTGAAATTTGGTTCCAACCTGGTTTTCATCTCAAGCAACGATCGCTTCAGACATTATGTTACCTTGCCAGGAATGTCCGTGGTTCTGTTCTGCAACAAGGCAACCCACAAGCAAGTATTGCTGGTATTGGAGCAAACATGCAAGAGATTTCCCTCTATTAATTTCCTCAAGGTGGAGATCGAAGACCACCCATATTTGGCAAAGTCAGAAGGCGTGAGCTCTGTCCCGGCCTTCAGAATATACAAGAACGGATCAAGGGTCAAAGAGATTCCGGGCAACAAACACGAGTTGTTAGAAAGATCGGTTAAACTGTATACTGGCTGA 2010 0.4697 MNWAVVLWGGFPFSEATCCENHPCVHYPLNLPTIYTARRAKTVTKSLRIMNPRERQIFPSSPTNQIRIRKPRKSTSGHHNSQNRRPSDAARSSTSSSGNSTSTKNDENKLQREPAGSSLELARISNSHQRENENKATVNLKLTGNLLTNNSPRTSVTKKVESVPKSKELNSVTSSHNNAGMGNIMRKNTDELAQLRRQRIRIDPEVLKAEGNEAYKQGKFEEALSLYDRAILLDSSKPTYHCNKSAALMGLGRLPEAMVECEEAIRLEPSYTRAHHRLAAIYLRLGEAEKAMHCNNSTPYGDSVLAFQAQALQKHVKKCLEARKVNEWNTILKETQYAISLCADSAPQVYALLTEALLKLLKHGEASSTYEKLPKFELDWSIKIFGVPHTAYLLIVGAQVQLAAGRFDDAVTAAQQAAELDPTNKEVNAAVRKTRAVRSARMSGNILFKASKFMEACGFYSEGLEHDPFNSVLLCNRAACRSKLGQFEKAIEDCSAALAVQPYYSKARLRRANCNAKLERWGAAIQDYEMLMREKPGDEEVARALFEAQLQLKMLRGEDIKDLKFGSNLVFISSNDRFRHYVTLPGMSVVLFCNKATHKQVLLVLEQTCKRFPSINFLKVEIEDHPYLAKSEGVSSVPAFRIYKNGSRVKEIPGNKHELLERSVKLYTG 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci2g0537 669 Gene3D Tetratricopeptide repeat domain 202 556 IPR011990 GO:0005515
Prci2g0537 669 Gene3D Glutaredoxin 570 668 - -
Prci2g0537 669 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 63 665 IPR044534 -
Prci2g0537 669 CDD TRX_family 578 661 - -
Prci2g0537 669 MobiDBLite consensus disorder prediction 120 158 - -
Prci2g0537 669 Pfam TPR repeat 211 252 - -
Prci2g0537 669 SUPERFAMILY Thioredoxin-like 557 659 IPR036249 -
Prci2g0537 669 MobiDBLite consensus disorder prediction 80 105 - -
Prci2g0537 669 SMART tpr_5 505 538 IPR019734 GO:0005515
Prci2g0537 669 SMART tpr_5 204 237 IPR019734 GO:0005515
Prci2g0537 669 SMART tpr_5 391 424 IPR019734 GO:0005515
Prci2g0537 669 SMART tpr_5 437 470 IPR019734 GO:0005515
Prci2g0537 669 SMART tpr_5 471 504 IPR019734 GO:0005515
Prci2g0537 669 SMART tpr_5 238 271 IPR019734 GO:0005515
Prci2g0537 669 Pfam Tetratricopeptide repeat 473 503 IPR001440 GO:0005515
Prci2g0537 669 Pfam Tetratricopeptide repeat 398 470 - -
Prci2g0537 669 SUPERFAMILY TPR-like 204 426 IPR011990 GO:0005515
Prci2g0537 669 ProSiteProfiles TPR repeat profile. 204 237 IPR019734 GO:0005515
Prci2g0537 669 MobiDBLite consensus disorder prediction 56 70 - -
Prci2g0537 669 Pfam Thioredoxin 604 660 IPR013766 -
Prci2g0537 669 ProSiteProfiles TPR repeat profile. 391 424 IPR019734 GO:0005515
Prci2g0537 669 MobiDBLite consensus disorder prediction 51 158 - -
Prci2g0537 669 SUPERFAMILY TPR-like 441 553 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci2g0537 Prci-Chr2 3941420 3945044 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci2g0537 K09527 - gmx:100814381 816.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0537 2 3941420 3945044 Prci15g0581 15 3798404 3801772 CCT