Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci15g0581 ATGGCAGGAAAGGCCGAGAACAAGATGCAGAGTGAACTGGGTTGTGGTTTCATGGGGAGGATTTTCCATCTCACTAGGTATAAGCTGAGAAAATCATCTGTTCATTCACTGCCCATGAAGGCTAGCAACAGTGTCCAGAGCGATCACAGTAAAACTGAATCCGAGAAGCCGCCAAATAATGAATCCAGTGCTGCTTCCGCCAAGTCCCACAACCAGGCTAGAAGGATTCCTTCTGATCATCGAAGACCTCCTACCGTCGGAAAGAATCAAAATCCGAGACCTTCAGACGCTGCAAGAAGCTCGACATCATCCTCCGGTAATTCATCCCAGACTAAGATTCAACAAAACCGCGAGTTGATTGACGATGGCAAAATACAGAGACAGCCTCCTGAAAACTCGTTGGAGCTCGCTAGGATTAGCACTCATTACCAGAGAGAGAACGGGAATAAATCCCCCCTCAAACTGACTGGTAATTTGCTTGTGAATAACCGCCCAAGGACTAGGACTGGGTGTCTTGAAATTGTTCCCGAGAATAGAGATGTGATGAATTCATTGATCAATTCTCGCGGCAATGCAAGTAGAGGCGTGACGGGGAATATTATGAGGAAGAACATGGATGAGCTTGCTCAGTTTCGAAGTCCGAAGAACAGAGCAGACCCTGAAGTGTTGAAGACAATGGGGAACGAAGCGTATAAGCAAGGAAGATTTGAAGAAGCTCTGGCTTTGTATGAGCGAGCGATTGCTGTTGATTCAAATAAGGCAACGTTTCATTGCAATAAGAGTGCAGCTTTGATTGGATTAGGCCGTCTTCTGGAAGCGATTGTTGAGTGCCAGGAAGCAATTCGGTTGGAGCCTTCTTATAACAGACCCCATCACCGTTTGGCAACCATATATCTCAGATTGGGAGAAGTAGAAAAGGCACTAAGTTACAATGTGGCAACCCCATATTCTGATCCTGCACTTGCTTTCCAAGCTCAGTCTCTTCGCAATCACCTTCAAAAATGCATTGAAGCAAGGAAAATCAACGAGTGGGATACTGTACTGAAGGAAACGCAATCTGCTATAGCATTAGGTGCTGATTCAAGTCCTCAGGTTTATGCTTTGCAAACAGAAGCCTTGCTTAAGCTCTTCAGACATGAAGAGGCGTATGCTGCCTATGAGAAAATGCCTAAATTTGCTATTAATTGGTGCACCAAGCTATTTGGTCTTGCTCGCAGTGCTTATCTATTTGTGATAGCCGCGCAGGTTTACTTGGCAGCTGGCAGGTTCGAAGATGCGGTGACAGCCGCTGAGCAAGCATCTAAACTTGATCCAAGTGATAAAGAGGTGAGTGTAGTGGTGAAGAGGGCGAGAGGGATGACGTCAGCCAGAATGAGCGGAAACTTGCTGTTCAAGGCTTCCAAATACACGGAAGCATGTGCTGCATACAGTGAAGGGCTAGAGCTCGATCCATACAATTCAGTTCTCCTATGCAACAGAGCAGCATGTCGTTCTAAGCTAGGTCAATTTGAGAAAGCGATTGATGATTGTAATGCAGCCCTTGCAGTTCAGCCCAGTTATAGCAAGGCACGGCTAAGGAGGGCAGATTGCAATGCCAAGCTGGAAAGATGGGAATCTGCAATTCAGGACTATGAAATGCTACTAAGGGAAAAGTCAGGAGATGAGGAGGTGGGGAGGGCTCTGTTCGAGGCTCAACTTCAACTCAAGATGCTGCACGGAGAAGATATCAAGTCTTTCAATCTCGGGTCTAATTTAGTTTCTATATCGAGCAATGATCAATTTCGACGTCATCTAACCTCACCTGGTACGTCTGTGGTGCTATTTTGCAATAACGCAACCCGCAAGCAAGTATTGCTAATGTTGGAGCAAACCTGCAAGAGGTTTCCATCTGTTAATTTCCTTAAGGTGGAAATTGAAGACCACCCCTACTTGGCAAAATTACAAGGTGTGAGCTCTGTCCCAACATTCAAAATATATAAGGATAGATCAATGGTTAAGGAAATTCCAGGCAACAATCACGAGTTATTAGAAAGATCAATTAAAATGTATAGTAGCTGA 2058 0.4519 MAGKAENKMQSELGCGFMGRIFHLTRYKLRKSSVHSLPMKASNSVQSDHSKTESEKPPNNESSAASAKSHNQARRIPSDHRRPPTVGKNQNPRPSDAARSSTSSSGNSSQTKIQQNRELIDDGKIQRQPPENSLELARISTHYQRENGNKSPLKLTGNLLVNNRPRTRTGCLEIVPENRDVMNSLINSRGNASRGVTGNIMRKNMDELAQFRSPKNRADPEVLKTMGNEAYKQGRFEEALALYERAIAVDSNKATFHCNKSAALIGLGRLLEAIVECQEAIRLEPSYNRPHHRLATIYLRLGEVEKALSYNVATPYSDPALAFQAQSLRNHLQKCIEARKINEWDTVLKETQSAIALGADSSPQVYALQTEALLKLFRHEEAYAAYEKMPKFAINWCTKLFGLARSAYLFVIAAQVYLAAGRFEDAVTAAEQASKLDPSDKEVSVVVKRARGMTSARMSGNLLFKASKYTEACAAYSEGLELDPYNSVLLCNRAACRSKLGQFEKAIDDCNAALAVQPSYSKARLRRADCNAKLERWESAIQDYEMLLREKSGDEEVGRALFEAQLQLKMLHGEDIKSFNLGSNLVSISSNDQFRRHLTSPGTSVVLFCNNATRKQVLLMLEQTCKRFPSVNFLKVEIEDHPYLAKLQGVSSVPTFKIYKDRSMVKEIPGNNHELLERSIKMYSS 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci15g0581 685 ProSiteProfiles TPR repeat profile. 220 253 IPR019734 GO:0005515
Prci15g0581 685 CDD TRX_family 592 681 - -
Prci15g0581 685 MobiDBLite consensus disorder prediction 35 131 - -
Prci15g0581 685 Gene3D Tetratricopeptide repeat domain 218 572 IPR011990 GO:0005515
Prci15g0581 685 SUPERFAMILY Thioredoxin-like 580 680 IPR036249 -
Prci15g0581 685 ProSiteProfiles TPR repeat profile. 453 486 IPR019734 GO:0005515
Prci15g0581 685 PANTHER TPR REPEAT-CONTAINING THIOREDOXIN 5 681 IPR044534 -
Prci15g0581 685 ProSiteProfiles TPR repeat profile. 407 440 IPR019734 GO:0005515
Prci15g0581 685 MobiDBLite consensus disorder prediction 84 116 - -
Prci15g0581 685 Gene3D Glutaredoxin 578 684 - -
Prci15g0581 685 SMART tpr_5 220 253 IPR019734 GO:0005515
Prci15g0581 685 SMART tpr_5 254 287 IPR019734 GO:0005515
Prci15g0581 685 SMART tpr_5 487 520 IPR019734 GO:0005515
Prci15g0581 685 SMART tpr_5 453 486 IPR019734 GO:0005515
Prci15g0581 685 SMART tpr_5 521 554 IPR019734 GO:0005515
Prci15g0581 685 SMART tpr_5 407 440 IPR019734 GO:0005515
Prci15g0581 685 MobiDBLite consensus disorder prediction 57 72 - -
Prci15g0581 685 SUPERFAMILY TPR-like 219 442 IPR011990 GO:0005515
Prci15g0581 685 Pfam TPR repeat 227 262 - -
Prci15g0581 685 Pfam Tetratricopeptide repeat 413 486 - -
Prci15g0581 685 Pfam Tetratricopeptide repeat 489 520 IPR001440 GO:0005515
Prci15g0581 685 SUPERFAMILY TPR-like 458 569 IPR011990 GO:0005515
Prci15g0581 685 Coils Coil 527 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci15g0581 Prci-Chr15 3798404 3801772 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci15g0581 K09527 - gmx:100782846 856.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci2g0537 2 3941420 3945044 Prci15g0581 15 3798404 3801772 CCT
Prci15g0581 15 3798404 3801772 Prci15g0581 15 3798404 3801772 ECH