Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci1g4018 ATGGCTACCGTCTCTGCCAGGTCTTCACCTCCATGGACTAGCCCTAACCCTAATTCTGATCTTAACCCTGAATTTACCGCTGACCAATCACAAACCCTCGATTTGGATTCCATAATACAACGCCAATCAATCCTACCTCACCAAGTCTCCTCTCAGCGAAGTCCCCCTAGTAGTCCACCACAGCATGCGCCGACGACCCCTACTCTGCTTCAACTCTCTTTCAACCAAGACCAAGCTTGCTTCGCCGCCGCCACAGACAACGGGTTCCGTATCTACAATTGCGATCCATTCCGGGAGCTCTTCCGCAGAGAGTTTGACGGGGGCAATGGCAGTACTGGGGGGATTGGTCATGTGGAAATGCTCTTCCGCTATAATATGTTGGCACTGGTTGGAGGTGGCACCCACCCTCAATACCCTCCGAGCAAGGTGATGATCTGGGATGATCATCAAGGCAGGTGCATTGGTGAGCTTTCGTTCCGATCAGCTGTTCGTGGTGTCCGGCTTCGACGAGACCGAATAATTGTAGTTGTGGAGCAGAAGATTTTCGTGTACAATTTCGCCGACTTTAAGTTACTTCATCAAATTGAGACCGTTGCAAACCCAAAGGGGCTCTGTGCAGTTTCCCAATTGGCTGATTCTATGGTGTTGGCGTGTCCTGGTTTGCACAAGGGTCAGATTCGAGTCGAGCATTATGCACAGAAGAAAACCAGATTCATTTCTGCTCATGATTCAAGAATAGCTTGTTTCGCTCTTACACTAGATGGGCAGTTACTCGCCACCGCCAGCACCAAGGGTACTTTAATTCGAATTTTTGATACAGCCAATGGCACGCTTCTTCAAGAAGTAAGAAGGGGTGCAAATGTGGCCGAGGTCTATAGTCTGGCATTCTCTTCTACCGCTCAGTGGCTAGCAGTCTCGAGTGATAAGGGTACTGTCCATGTTTTCAGCCTTAAGGCTAACTCCAGTTCTCCTCAGCATGAAAAATCAAAGATGCCAACTGATTCTCATGCTGCCAGTATACCATCTAGCTCACCCCTTGCATTAGTCAAATTTAAAGGAGTGTTACCTAAGTATTTCAATTCAGAGTGGTCACTTGCTCAGTTTCGCTTACGTGAGGGCACTCGCTACACTGTCGCATTTGGTCAGCAAAAGAATACAGTCATAATTCTTGGCATGGATGGGAGCTTCTACCGGTGTCAGTTTGACCCAGTGCATGGTGGTGAGATGAATAAACTGGAATATCAGAACTTCTTAAAGCCAGAGACAGCCTCGTGA 1275 0.4816 MATVSARSSPPWTSPNPNSDLNPEFTADQSQTLDLDSIIQRQSILPHQVSSQRSPPSSPPQHAPTTPTLLQLSFNQDQACFAAATDNGFRIYNCDPFRELFRREFDGGNGSTGGIGHVEMLFRYNMLALVGGGTHPQYPPSKVMIWDDHQGRCIGELSFRSAVRGVRLRRDRIIVVVEQKIFVYNFADFKLLHQIETVANPKGLCAVSQLADSMVLACPGLHKGQIRVEHYAQKKTRFISAHDSRIACFALTLDGQLLATASTKGTLIRIFDTANGTLLQEVRRGANVAEVYSLAFSSTAQWLAVSSDKGTVHVFSLKANSSSPQHEKSKMPTDSHAASIPSSSPLALVKFKGVLPKYFNSEWSLAQFRLREGTRYTVAFGQQKNTVIILGMDGSFYRCQFDPVHGGEMNKLEYQNFLKPETAS 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci1g4018 424 SUPERFAMILY WD40 repeat-like 66 321 IPR036322 GO:0005515
Prci1g4018 424 MobiDBLite consensus disorder prediction 1 31 - -
Prci1g4018 424 FunFam Autophagy-related protein 18a isoform A 67 403 - -
Prci1g4018 424 Pfam WD domain, G-beta repeat 289 315 IPR001680 GO:0005515
Prci1g4018 424 SMART WD40_4 275 316 IPR001680 GO:0005515
Prci1g4018 424 SMART WD40_4 232 272 IPR001680 GO:0005515
Prci1g4018 424 PANTHER WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES WIPI -RELATED 65 417 - -
Prci1g4018 424 MobiDBLite consensus disorder prediction 46 67 - -
Prci1g4018 424 Gene3D - 60 338 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci1g4018 Prci-Chr1 55449526 55454569 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci1g4018 K22991 - gmx:100781692 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci1g4018 1 55449526 55454569 Prci1g4018 1 55449526 55454569 ECH
Prci1g4018 1 55449526 55454569 Prci3g3756 3 46558581 46562938 ECH