Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g2195 ATGGGGCTTTGCCTCTGTAAGTCTCGAGCTAAGGATGATGATTCTGATCATCGTGTGGAGTTGGCTTCTGGAAACGTACAACTTATTACCAGCAAAGAATCATGGGATCAAAAGGTTGAAGAAGCAACAAGGGATGGCAGAATTGTGATTGCAAATTTCAGTGCTGCATGGTGTGGTCCTTGTAAGGCTATTGCGCCGTATTACAGCGAGTTATCTGAGAAATACCCATCTTTGATGTTCTTGTTAATTGACGTGGATGAACTAGCTGACTTCAGCACTTCATGGGACATCAAAGCCACTCCAACTTTCTTCTTTCTCAAAAATGGACAACAGATTGACAAACTTGTAGGAGCCAACAAACCAGAGCTGCAGAAGAAGATTAATGCCATTGTTGAACCAATTTCCAGTTCCCAGAGTCAATGGTGA 426 0.4272 MGLCLCKSRAKDDDSDHRVELASGNVQLITSKESWDQKVEEATRDGRIVIANFSAAWCGPCKAIAPYYSELSEKYPSLMFLLIDVDELADFSTSWDIKATPTFFFLKNGQQIDKLVGANKPELQKKINAIVEPISSSQSQW 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g2195 141 Pfam Thioredoxin 29 128 IPR013766 -
Prci13g2195 141 SUPERFAMILY Thioredoxin-like 21 132 IPR036249 -
Prci13g2195 141 CDD TRX_family 33 128 - -
Prci13g2195 141 PANTHER THIOREDOXIN 26 128 - -
Prci13g2195 141 FunFam Thioredoxin 22 132 - -
Prci13g2195 141 PRINTS Thioredoxin family signature 49 57 - -
Prci13g2195 141 PRINTS Thioredoxin family signature 96 107 - -
Prci13g2195 141 PRINTS Thioredoxin family signature 57 66 - -
Prci13g2195 141 Gene3D Glutaredoxin 1 138 - -
Prci13g2195 141 ProSiteProfiles Thioredoxin domain profile. 8 132 IPR013766 -
Prci13g2195 141 ProSitePatterns Thioredoxin family active site. 50 68 IPR017937 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g2195 Prci-Chr13 36589758 36593781 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g2195 K03671 - oeu:111405968 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g2195 13 36589758 36593781 Prci12g0028 12 246864 249687 CCT
Prci13g2195 13 36589758 36593781 Prci13g2195 13 36589758 36593781 ECH