Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0028 ATGCAAGAGAAGTCTTCAACCAAGGATAACTATTCTGATCATCATGTGGATTTTGCTGCTGGGAATGTACAACTTATTACTTCCAAAGAATCTTGGGATCTGAAGATGGAAGAAGCAAGAAAAGATGGCAAAATTGTGATTGCAAACTTCAGTGCATCATGGTGTGGCCCTTGTAAGATGATTGCACCTTATGTCTGTGAGTTATCAGAGAAATACCCGTCAATCATATTCTTAGTAATTGACGTTGATGAACTCACTGACTTTAGCACTTCCTGGGATATCAAAGCCACTCCAACTTTCTTCTTTCTCAGAGATGGGAATCAGATTGACAAACTGGTAGGAGCCAACAAGACTGAGCTGCTGAAGAAAATTGTTGCCATTACTGACTCAATTGTTGAGCGTCAATAA 408 0.3971 MQEKSSTKDNYSDHHVDFAAGNVQLITSKESWDLKMEEARKDGKIVIANFSASWCGPCKMIAPYVCELSEKYPSIIFLVIDVDELTDFSTSWDIKATPTFFFLRDGNQIDKLVGANKTELLKKIVAITDSIVERQ 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0028 135 ProSiteProfiles Thioredoxin domain profile. 5 129 IPR013766 -
Prci12g0028 135 Pfam Thioredoxin 27 124 IPR013766 -
Prci12g0028 135 CDD TRX_family 37 126 - -
Prci12g0028 135 Gene3D Glutaredoxin 1 134 - -
Prci12g0028 135 PRINTS Thioredoxin family signature 54 63 - -
Prci12g0028 135 PRINTS Thioredoxin family signature 93 104 - -
Prci12g0028 135 PRINTS Thioredoxin family signature 46 54 - -
Prci12g0028 135 PANTHER THIOREDOXIN 23 124 - -
Prci12g0028 135 ProSitePatterns Thioredoxin family active site. 47 65 IPR017937 -
Prci12g0028 135 SUPERFAMILY Thioredoxin-like 19 124 IPR036249 -
Prci12g0028 135 FunFam Thioredoxin 20 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0028 Prci-Chr12 246864 249687 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0028 K03671 - gmx:100813401 219.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g2195 13 36589758 36593781 Prci12g0028 12 246864 249687 CCT