Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1342 ATGGATATTGGAAGTAATTCTAGTAGTGATGGAACTGAGAATCCTACCCCGAATTCCAACAATCCTACTCCCAATTCCAACAATCCCACCCTTGCTAGCCATAATGACTCCACATCTGGAACCCCATCAGTTCGCGGGAAAAAAGATCCTGCATGGGCACATGTTGCTTTAAGAAAAGAGGGCAACAAAAATGTGTATACATGTCTTTATTGTGCATTGAGTTATAAAGGAGGTGGAATAAATAGATTGAAGCATCATCTTGCTGGTATAAGTGGAAATGTAGTTTCCTGTAGTAAAGTTCCTTTTGATGTTCGTTATCAGATGCAAGAATCATTAAAAAGTGGGAAAAAGAGAAAGCTTGTCGATGTACAAGCAGACATGGAGGAACATGTGTCTAATGCTAATGAACCCAATACACCTGCTCCATCTAAGTCAATCCCTGAGAGTAATGCTAGTAAAAAAAAACCTCCTACTATGCTAGTTGAAAATTATTTTGCCTCTAGGACAACTCCAGGTTCCCAACCAGGCATTAAGAGTGCATTTGCAACTAAAGAAGCACAACACAGTGCAAAAATGGCCATTGCTGAATGGGCGATCATTAATTGTATTCCATTTAATGCATTAGATTGCCCATTCTTTCAAAAAGCTATGGATGCTATTGCTTCAATTGGGCCGGGGTTTAAGGGTCCTACTGCTTATGAATTTAGAGTTAACTTGTTGAATGATTGGAAAAAAGAATGTCAGCTACTTATTGAGAGTCATCGATCTAAATGGAAAACTTATGGATGTACACTCATGGCTGATGGTTGGACAGATGTGAGGCAACGAACTTTGATAAATTTTCTTGTCTATTTTACACATGGCATAGTATTTGTAAAATCTGTTGATGCTTCTGATTTAGTGAAAGATGCCAAGACTTTATTCTCATTGTTTTCTGAAGTGATTGAGTGGGTTGGTCCCAAAAATATTGTACATGTGGTGACTGATAATGCTGCTAATTATGTAGCATGTGGCAAGTTGATTAAAGAGAAATATAAAAGTATTTATTGGTCACCTTGTGCTGCTCATTGCTTGAATCTTACTTTGAAAGATATTGCAAGTATGTCTCATGTGTCACAACTTGCAACAAAGGCATCAAAGATCACTGTGTTTGTTTATAATCATATGGTCTTTCTGTCATGGCTCAGGAAAAGAAAGGGTTGGAAAGAAATTGTGCGTCCTGGTGCGACAAGGTTTGCTACAACATTTATCACATTGCATAGCATATATATGCACAAGCATGACTTACAAGCTTTAATCACTGATAAGCATTTTGTGGATCACAAATTATCAAGGACCGAAGCTGGAATAATTGTTAGTGCCATCATATTAGATAATCGGTTTTGGAATGAATGTCTTGAAGTTGTGAAGATTGTGTCTCCTCTTATAAAGTTGTTGAGAATTGTTGATTCAGATGAGAAGCCTTCTTTGCCTTATGTTTATGAAGGCATGCAAAGGGCAAAAAAAGCAATTAAGGCAGTCTTCACCAATAAGAAAGACCAATACAAGCCTTACACAGATATAATCCAAGCCCGATGGGATAAGCACTTGAAGACCAATCTTCATGCAGCAGCATATTTGTTGAACCCTGCCTTCTTGTATGATGATGACTTTGTTCATAAAAGAAGGTTAATGGATGCTATGCTTTCAGTGTTTGAGTCAACTGAAAATGAAGATGTTGATTATATTGTGATGATGAAGCAGTTGAGCTTGTATCGTGACCGTAAAGAATCTTTTGATAAAGCTTCATGTCATAGAGCAGCACAGAAGCTAGACCCTTATGAATGGTGGTCGTTTTATGGAAGTTCTGTTCCAGAGTTGCAAAATCTTGCAATGCGTATTCTTAGCCAAACTTCTTCCTCTTCTGGTTGTGAGAGAAATTGGAGCTTGTTTGAACGCATCCATACCAAAAGAAGAAATAGATTGGAACATCAAAGACTAAATGATTTAGTCTTTACAAACTACAATCTACGATTGAAGAATAGGAGCCAATTGAAGAAAAAGACAAGTTTTGATCCAATTGATTATGAATCTATTGACAAATTGGACTTTTGGATTGCTGAAGAGGAACAAGAGCCAGCTCCTGAGTTTGATGCTGATGATGTCACTAATTTGGAAAGTGCTATGCATAATGAGAATGTTGTAGCTTCATCAGCTTCTGAGAGAAATAATGAAGGGGAAGAAGATATGAATATTTCAGAGCATCCACATTTGAATGATGATGTTGGAAGTGGTTCTGGTTTCTCTCAATCATCTCCTAATGTTTCAATCCTTACTCCCGGAGATTTGAATGAAATTAATGAGGATTTTGGTGTTGATTATTATTAG 2367 0.3726 MDIGSNSSSDGTENPTPNSNNPTPNSNNPTLASHNDSTSGTPSVRGKKDPAWAHVALRKEGNKNVYTCLYCALSYKGGGINRLKHHLAGISGNVVSCSKVPFDVRYQMQESLKSGKKRKLVDVQADMEEHVSNANEPNTPAPSKSIPESNASKKKPPTMLVENYFASRTTPGSQPGIKSAFATKEAQHSAKMAIAEWAIINCIPFNALDCPFFQKAMDAIASIGPGFKGPTAYEFRVNLLNDWKKECQLLIESHRSKWKTYGCTLMADGWTDVRQRTLINFLVYFTHGIVFVKSVDASDLVKDAKTLFSLFSEVIEWVGPKNIVHVVTDNAANYVACGKLIKEKYKSIYWSPCAAHCLNLTLKDIASMSHVSQLATKASKITVFVYNHMVFLSWLRKRKGWKEIVRPGATRFATTFITLHSIYMHKHDLQALITDKHFVDHKLSRTEAGIIVSAIILDNRFWNECLEVVKIVSPLIKLLRIVDSDEKPSLPYVYEGMQRAKKAIKAVFTNKKDQYKPYTDIIQARWDKHLKTNLHAAAYLLNPAFLYDDDFVHKRRLMDAMLSVFESTENEDVDYIVMMKQLSLYRDRKESFDKASCHRAAQKLDPYEWWSFYGSSVPELQNLAMRILSQTSSSSGCERNWSLFERIHTKRRNRLEHQRLNDLVFTNYNLRLKNRSQLKKKTSFDPIDYESIDKLDFWIAEEEQEPAPEFDADDVTNLESAMHNENVVASSASERNNEGEEDMNISEHPHLNDDVGSGSGFSQSSPNVSILTPGDLNEINEDFGVDYY 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1342 788 MobiDBLite consensus disorder prediction 756 774 - -
Prci13g1342 788 MobiDBLite consensus disorder prediction 1 47 - -
Prci13g1342 788 Pfam BED zinc finger 49 87 IPR003656 GO:0003677
Prci13g1342 788 ProSiteProfiles Zinc finger BED-type profile. 46 104 IPR003656 GO:0003677
Prci13g1342 788 MobiDBLite consensus disorder prediction 1 44 - -
Prci13g1342 788 SUPERFAMILY Ribonuclease H-like 254 674 IPR012337 -
Prci13g1342 788 MobiDBLite consensus disorder prediction 735 749 - -
Prci13g1342 788 MobiDBLite consensus disorder prediction 130 155 - -
Prci13g1342 788 Pfam Protein of unknown function (DUF 659) 230 381 IPR007021 -
Prci13g1342 788 PANTHER OSJNBA0013A04.12 PROTEIN 64 674 - -
Prci13g1342 788 MobiDBLite consensus disorder prediction 728 776 - -
Prci13g1342 788 MobiDBLite consensus disorder prediction 131 152 - -
Prci13g1342 788 Pfam hAT family C-terminal dimerisation region 598 670 IPR008906 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1342 Prci-Chr13 12282292 12284920 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1342 - - pcin:129297788 1471.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g1342 13 12282292 12284920 Prci12g2119 12 38603864 38613581 CCT