Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2119 ATGGACGCAAGCGAGAACTGTTGTTCAATTCAACTTATTGATGGAGATGGTACATTCAATGTTGCTGGAATTGAACAATTTATGAAGGAGGTGAAATTGGGTGAATTTGGACTTTCATATGCTATAGTTTCTATAATGGGCCCACAAAGTAGTGGTAAGAGCACTCTATTAAATCATTTGTTCAGAACTAATTTCAGGGAGATGGATGCTTTCAGGGGAAGGTCTCAAACCACTAAAGGAATTTGGATGGCTAGATGTGCTGGCTTGGAGCCTTGTACAATAGTGATGGATTTGGAGGGCACGGATGGAAGAGAACGTGGAGAGGATGATACTGCTTTTGAAAAGCAGAGTGCTCTATTTGCTCTTGCTGTTTCGGATATAGTGCTGATAAACATGTGGTGTCATGACATTGGGCGTGAGCAAGCTGCAAATAAACCTCTTTTGAAAACTGTCTTTCAGGTCATGATGAGGTTGTTTAGTCCGCGCAAAACGACATTGATGTTTGTCATTCGTGATAAAACAAGGACGCCTCTTGAAAATTTAGAGCCTGTTTTACGAGAGGATATTCAGAAGATATGGGACTCTGTTCCTAAGCCACAGGCTCACAAGGAAACCCCACTAAGTGAATTTTTCAATGTCGAAGTTGTTGCTCTTTCTAGTTATGAAGAAAAGGAAGAGCAATTTAAGGAACAGGTTGCCAGCTTGAGGCAACAATTCCATCATTCTATCGCTCCTGGTGGACTTGCTGGGGATAGACGTGGAGTAGTTCCTGCTTCTGGATTTTCTTTCAGTGCACAGCAAATTTGGAGAGTCATTAAGGAGAACAAGGACCTTGACCTACCTGCCCACAAGGTCATGGTTGCTACTGTACGCTGTGAAGAAATTGCCAATGAAAAATATGCTGCTTTTACTACAAACGAGGAATGGTGTCAGTTGGAGGAGGCTGTGCAATCTGGCCCAATTCCTGGATTTGGGAAAAGGCTGAATTCAATCCTTAATAATTGTCTTTCAGAGTATGATATAGAAGCCACTTATTTTGATGAAGGTGTCAGATCTGCAAAACAAAAGCAGCTTCAAGAAAAACTGTTGCAACTTGTCCAACCAGCATTCCAATCTGCATTGGGACATATAAGGTCGGGAACTTTTGATAAATTCAAGGAAGCATTTGACAAAGCTTTGAATGGAGGGGATGGGTTTTCTGCTGCTGCTAAAAACTGTGTTGAGTCTTGTATGGCTCAGTTTGATGAAGCATGTGCAGATGTTGTTATTGAAAAAGCAAACTGGGATACATCTAAAGTGAGGGAGAAATTGCGTCGTGACATTGATGGCCATGTGGCTTCTGTGCGTGCAGCTAAGCTGTCTGAATTGACATCATCGTATCAGGAAAAATTGAAGGAGGCCTTAGCTGGACCTGTTGAAGCTCTTTTAGATGAAGCTAACACTCATACTTGGCCAACAATAAGAAAACTTCTTGGGCGTGAAACTGAATCAGCTGTTTCGGGTTTCTCTGCTGCAATTTCTGGGTATGATATGGAGGAACAAACACGACAGAACATGATTAAAAGTTTAGAGGGCTATGCAAGGGGTGTGGTGGAAGCAAAGGCTAAGGAAGAATCTGGAAGGGTTCTAAGTCGTATGAAAGATAGGTTTACAACATTATTTAGTCGTGATTCTGATTCAATGCCTCGAATCTGGACGGGGAAGGAAGACATTCGAGCAATTACTAAGACCTCCCGCTCTGCTTCCTTGAAGTTGCTATCTGTTATGGCTGCAACTCGTTTGGATGACCAAGATTTTGATAATATTGAGAAAACATTAGCATTTGCTCTGGACGATTCATCAGGAACTATTACTAAGGATAGGAGCATCACGGTGGTTGATCCACTGGCTTCAAGCACTTGGGAACAGGTTCCTTCCTCAAAAACATTGATCACACCTGTACAGTGCAAATCATTGTGGAGGCAATTTAAGATGGAGACAGAGTATCATGTTTCTCAGGCCATATCTGCACAGGAGGCCAACAGGCGTAATAATAACTGGTTACCTCCTCCATGGGCCATTGTTGCTTTGGTTGTTCTGGGATTTAATGAATTTATGACCCTTCTAAGAAATCCATTGTATTTGGGTGTCATCTTTGTTGGATTTCTTCTTGTAAAAGCCCTATGGGTGCAGCTGGACATTTCTAATGAATTCAGCAGTGGAGTTCTTCCGGGACTTATATCCTTGTCTGCCAGATTTCTTCCTACTGTCATGAACATTATCAGAAAACTAGCGGAGGAGGCACAGAACCCTGCACCTAACAGTGCACAGAGAAACCCATCAGGAGGCAATCACAATGTTGTTACAGCTGGAAGCAATATGTCATCTAGTGCTTCTTCTGCTGCAGCTTTGTCCGAGAAAGCTTCGTCTAACATAACTTCACTGGAAAATGGTATCGAATACTCTAGTTCATCAAACAATGAGTAG 2466 0.4221 MDASENCCSIQLIDGDGTFNVAGIEQFMKEVKLGEFGLSYAIVSIMGPQSSGKSTLLNHLFRTNFREMDAFRGRSQTTKGIWMARCAGLEPCTIVMDLEGTDGRERGEDDTAFEKQSALFALAVSDIVLINMWCHDIGREQAANKPLLKTVFQVMMRLFSPRKTTLMFVIRDKTRTPLENLEPVLREDIQKIWDSVPKPQAHKETPLSEFFNVEVVALSSYEEKEEQFKEQVASLRQQFHHSIAPGGLAGDRRGVVPASGFSFSAQQIWRVIKENKDLDLPAHKVMVATVRCEEIANEKYAAFTTNEEWCQLEEAVQSGPIPGFGKRLNSILNNCLSEYDIEATYFDEGVRSAKQKQLQEKLLQLVQPAFQSALGHIRSGTFDKFKEAFDKALNGGDGFSAAAKNCVESCMAQFDEACADVVIEKANWDTSKVREKLRRDIDGHVASVRAAKLSELTSSYQEKLKEALAGPVEALLDEANTHTWPTIRKLLGRETESAVSGFSAAISGYDMEEQTRQNMIKSLEGYARGVVEAKAKEESGRVLSRMKDRFTTLFSRDSDSMPRIWTGKEDIRAITKTSRSASLKLLSVMAATRLDDQDFDNIEKTLAFALDDSSGTITKDRSITVVDPLASSTWEQVPSSKTLITPVQCKSLWRQFKMETEYHVSQAISAQEANRRNNNWLPPPWAIVALVVLGFNEFMTLLRNPLYLGVIFVGFLLVKALWVQLDISNEFSSGVLPGLISLSARFLPTVMNIIRKLAEEAQNPAPNSAQRNPSGGNHNVVTAGSNMSSSASSAAALSEKASSNITSLENGIEYSSSSNNE 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2119 821 Pfam Sey1 three-helix bundle domain 323 760 IPR046758 -
Prci12g2119 821 ProSiteProfiles GB1/RHD3-type guanine nucleotide-binding (G) domain profile. 37 252 IPR030386 GO:0005525
Prci12g2119 821 Coils Coil 218 238 - -
Prci12g2119 821 CDD GBP 37 219 - -
Prci12g2119 821 Pfam Root hair defective 3 GTP-binding protein (RHD3) GTPase domain 46 281 - -
Prci12g2119 821 Gene3D - 11 245 IPR027417 -
Prci12g2119 821 MobiDBLite consensus disorder prediction 763 787 - -
Prci12g2119 821 Hamap Protein SEY1 [SEY1]. 9 762 IPR008803 -
Prci12g2119 821 FunFam Protein ROOT HAIR DEFECTIVE 3 homolog 18 273 - -
Prci12g2119 821 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 247 IPR027417 -
Prci12g2119 821 PANTHER PROTEIN SEY1 5 779 IPR008803 -
Prci12g2119 821 MobiDBLite consensus disorder prediction 762 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2119 Prci-Chr12 38603864 38613581 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2119 K22698 - gmx:100777656 1331.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g1342 13 12282292 12284920 Prci12g2119 12 38603864 38613581 CCT