Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g1055 ATGTCTGCTGCTGTGTGTGGAAGCAAGAGATCTTTCTTTGAAGATATTCCTCCGTCGCCTCCAGTATCTAAGAGGCTCCGTTGCTCATCTTCTCCCATTCGTTTCACCGCTCCGTGCCTCGTCGATCAGCTTCAGGCGGTGTTCCCTCAAATGGAAGTTCAGCTTCTTGAGAGAGCTCTCCAAGAATGTGGAAATGATCTAGATGTTGCTGTCAAAAGCTTGCATGATCGTTGCCTGGGATCTGCTGATGAAAATTCTGGTGCTGCCGAACAATCCGATGCTAATGTGGTAGCAGGTACTTTGAGAGATGATGGGCATGCTTCTGCTTCTGAGAGCCAATCAGCTTCAAAGCTTTCTGCAGATGGAGCAGAATGGGTTGACTTGTTCGTGAGAGAAATGATGAGTGCTATTACTGTTGATGATGCTAGAATCCGTGCTTCTAGAATGTTGGAGGTTTTAGAGAGATCAATCAGTGGGCATGCAAGTGCTGAGGCAACACATGTTATTCAAAAGGAAAATATGATGTTGAAAGAGCAAATTGAAGGGCTGACTAGGGAGAATACTATTTTAAAAAGTGCTTTTAAAATCCAGCATGAACGTCAGATTGAGCATGAAAATAAGAGTCAAGAGTTGCAGCAGTTGAAGCAGTTGATGTCTCAATACCAGGAACAGTTGAGAACTCTTGAGGTGAATAACTATGCTTTGGCAATGCATCTGAAGCAGGCTCAGCAGTGCAACTCCTTTCCCGGTCGTTTCCATCCTGATGTCTTCTAA 774 0.4457 MSAAVCGSKRSFFEDIPPSPPVSKRLRCSSSPIRFTAPCLVDQLQAVFPQMEVQLLERALQECGNDLDVAVKSLHDRCLGSADENSGAAEQSDANVVAGTLRDDGHASASESQSASKLSADGAEWVDLFVREMMSAITVDDARIRASRMLEVLERSISGHASAEATHVIQKENMMLKEQIEGLTRENTILKSAFKIQHERQIEHENKSQELQQLKQLMSQYQEQLRTLEVNNYALAMHLKQAQQCNSFPGRFHPDVF 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g1055 257 Pfam CUE domain 41 73 IPR003892 GO:0043130
Prci13g1055 257 CDD CUE 40 74 - -
Prci13g1055 257 Coils Coil 204 231 - -
Prci13g1055 257 SUPERFAMILY UBA-like 40 79 IPR009060 GO:0005515
Prci13g1055 257 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 257 - -
Prci13g1055 257 ProSiteProfiles CUE domain profile. 36 82 IPR003892 GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g1055 Prci-Chr13 8827883 8831570 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g1055 - - zju:107407473 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g1055 13 8827883 8831570 Prci12g1817 12 35961820 35968080 CCT
Prci13g1055 13 8827883 8831570 Prci13g1055 13 8827883 8831570 ECH