Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1817 ATGTCTGCTGCAGTGTGTGGGAGCAAGAGATCTTTCTTTGAAGACCTTCCTCCATCACCTCCAGTATCCAAGAAGCTACGTTGTTCATCTTCAACTTCGCCTGTCCGTTTGTCGGCTCCCAGTCTCATCCATCAGCTTCGGGCTGTATTTCCTCACATGGATGACCAGGTCCTTGAGAGAGCACTCCAAGAATGTGGCAATGACATAGATGCTGCCATTAAGAGCTTGCATGAACTTTGCTTGGGATCTGCAAATGACAATTCTGCTACTGCTGAAGATTCAAAAGTTAATGTGGAGACAGGTAAAGTGGAGTATGATTTTGATGCTTCTGCTTCTGAGAGTGAGACAGCTTCGAACAACCTTCCTGCTGATGGAGCTGAGTGGGTTGACCTTTTTGTGAGAGAAATGGCAGGTGCTACTAGTATTGATGATGCTAAAGCCCGTGCTGCTAGAATTCTGGAGGTTCTAGAAAAATCAATCTGTGAACGTACTCATGTGGGGGCAACTCATGTTAATCAGAAGGAAAATTTGGTGCTGAAGCAGCAAATTGAAGTGTTGATTAAGGAGAATAATATTCTTAAACAAGCGGTGAAAATCCAACATGAGCGACTTGCTGATTATGATAACAAGGTTCTAGAGTGTCAACATTTGAAGCAGGCGTTATCTCACAGCCAGGAGCAGTTGAGATCTCTTGAGGTGAAAAACTATACATTACTAATGCATTTGAAGCAAGCTCAACAGTGCAACACCTTTCCTGGGCGGTTCCCTCCTGATGTTTTCTAA 783 0.4393 MSAAVCGSKRSFFEDLPPSPPVSKKLRCSSSTSPVRLSAPSLIHQLRAVFPHMDDQVLERALQECGNDIDAAIKSLHELCLGSANDNSATAEDSKVNVETGKVEYDFDASASESETASNNLPADGAEWVDLFVREMAGATSIDDAKARAARILEVLEKSICERTHVGATHVNQKENLVLKQQIEVLIKENNILKQAVKIQHERLADYDNKVLECQHLKQALSHSQEQLRSLEVKNYTLLMHLKQAQQCNTFPGRFPPDVF 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1817 260 CDD CUE 41 76 - -
Prci12g1817 260 SMART cue_7 38 80 IPR003892 GO:0043130
Prci12g1817 260 Gene3D - 30 85 - -
Prci12g1817 260 Coils Coil 214 234 - -
Prci12g1817 260 Pfam CUE domain 41 76 IPR003892 GO:0043130
Prci12g1817 260 PANTHER UBIQUITIN SYSTEM COMPONENT CUE PROTEIN 1 260 - -
Prci12g1817 260 SUPERFAMILY UBA-like 40 84 IPR009060 GO:0005515
Prci12g1817 260 ProSiteProfiles CUE domain profile. 38 84 IPR003892 GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1817 Prci-Chr12 35961820 35968080 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1817 - - qsa:O6P43_018011 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g1055 13 8827883 8831570 Prci12g1817 12 35961820 35968080 CCT
Prci12g1817 12 35961820 35968080 Prci12g1817 12 35961820 35968080 ECH