Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0982 ATGACGACGAAGCAATCCAACCCAGCAGATGTGTTCTCCTCTGAGAGCTGGTTGGACGATGCCTGCATTCTCGACATCGACTTCTTCGTGAAAACTCTCTCAGGCGTTAAATCAAAAGGCGTGTGTCCAGACCTAATCGGCTCCATTATCACTCACTACGCCTCTAAATGGCTCCCCGAAGTCTCTTCAATCGACGTCGCGGAACGCAGCCTCACCCAATTCCAAGAATCCCCCGAAAGAGTCGCCGTTTCGTGGATGAAGAAGCGCTTCTTCGTCGAAACCCTATTGGGTGTTCTGCCTCCGGAGAGAAACTCGATCCCCTGCAATTTCCTGCTTCGCCTCCTCAGAACAGCCAACATGGTGGGCGTTGAGGCCGCGCATAGATCGGAGCTTGAGATGAGGATTTCGTGGCAGCTGGACGAGGCATCGTTGAAGGAGCTAATGATTCCTTCTTTCAATCACACTTGTGACACATTGTTGGATGTAGAGCTTGCGATTAGGTTGGTGAATGGGTTCGTGAGTTTGGATCGCGAAGGTGCTAAGAGTGGTGCTGCTTTGGTTAAGGTGGCTAAGTTAGTGGACTCGTACCTGGCCGAGGCCGCCATTGATGCCAATTTGAGCTTGTCTGAGTTCGTTGCGCTTGCAGGAGCTCTTCCTACGCATGCAAGAGCTACAGACGATGGATTGTACAGAGCCATTGACACTTACCTTAAAGCGCATCCAGGAGTATCGAAGCAAGAAAGGAAGGTCATGTGTAGACTGATAGATAGCGCCAAACTCACGCTCGAGGCGTCGCTTCACGCTGCTCAAAACGAACGCTTGCCGGTCCGAGCAGTCTTACAGGTTCTCTTCTCCGAGCAGACCAAACTGAATCGCCAGCTGGAGCCGGAGCCGCCCGCGAGGTGCGTGTCGAGGCGAGAGACCTTGGGGCAACAGGTGAAGGAGATAAAGAAGCTGAAGGAAGATGTGGTGAGGCTGCAAGGACAGTGCAACGCGATGCAGGCTCAGATGGAAAGCATGGCAGAGAAGAAGAAGCTGGGATTCTTCAGGTGGAAGAAGCTAGTGTCGGTGCCTACCTCCGCCGCCGCCACTGCCGCAGGTGGCGGTGGCTTAAGTAAGAGTGTGGAGATGAGCAACACTGAAGATGATAACGACGATAATGGTGTTGTTGGGCTTCGGAGACAAGCGCCCATGGAGGTAAGGACGAGGATGGTCGAAGGTCAGACTCGTCATCCCAGGTGGAGGAGATCCATGTCCTGA 1260 0.5333 MTTKQSNPADVFSSESWLDDACILDIDFFVKTLSGVKSKGVCPDLIGSIITHYASKWLPEVSSIDVAERSLTQFQESPERVAVSWMKKRFFVETLLGVLPPERNSIPCNFLLRLLRTANMVGVEAAHRSELEMRISWQLDEASLKELMIPSFNHTCDTLLDVELAIRLVNGFVSLDREGAKSGAALVKVAKLVDSYLAEAAIDANLSLSEFVALAGALPTHARATDDGLYRAIDTYLKAHPGVSKQERKVMCRLIDSAKLTLEASLHAAQNERLPVRAVLQVLFSEQTKLNRQLEPEPPARCVSRRETLGQQVKEIKKLKEDVVRLQGQCNAMQAQMESMAEKKKLGFFRWKKLVSVPTSAAATAAGGGGLSKSVEMSNTEDDNDDNGVVGLRRQAPMEVRTRMVEGQTRHPRWRRSMS 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0982 419 Coils Coil 309 343 - -
Prci13g0982 419 PANTHER OS12G0117600 PROTEIN 14 363 IPR043454 -
Prci13g0982 419 MobiDBLite consensus disorder prediction 362 419 - -
Prci13g0982 419 ProSiteProfiles NPH3 domain profile. 15 289 IPR027356 -
Prci13g0982 419 Pfam NPH3 family 16 265 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0982 Prci-Chr13 8193821 8197698 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0982 14 294 EF-hand Containing Proteins AT3G44820 35.714 4.80e-50 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0982 - - qsa:O6P43_027835 535.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g0982 13 8193821 8197698 Prci12g1887 12 36448096 36451504 CCT
Prci13g0982 13 8193821 8197698 Prci13g0982 13 8193821 8197698 ECH