Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1887 ATGTTCAGTGAAAGGAACAAGCAGTCTCAGCCTGAACAGCCCATGATAGCAAAATCGCCGTCACATTTCTCGTCGGAATGCTGGTTCGACGACGCATGCATATTGGACATGGACTACTTCGTCAAAACCCTCTCAGGCATTAAAGCAAAAGGCGTGCGTGCAGACCTAATCGGCTCCATCATCATCCACTACGCCTCCAAATGGCTTCCCGAACTCTCCGACGGCAACATCGACGTCGTCTCCAACAAACCCTCCCTCACTCAATTCCAAGAATCGCCGGAAAGCGTGACGGCCTCGTGGATGAAGAAGCGATTCTTCGTCGAAACGCTCGTCGGAGTTCTACCTCCGGAGAAGGACTCAATCCCCTGCAATTTCCTGCTTCGACTTCTGAGAACGGCGAATATGGTCGGCGTGGAGCTGAATTACAAATCAGAGCTGGAGAAGAGGATATCGTGGCAGCTAGATCAGGCGTCTTTGAAGGAGATAATGATACCGTCGTTCAGTCACACGTGTGAGACGCTGTTAGATGTGGAGCTTGTGATAAGGTTGGTGAAGAGATTTGTGGGATTAGACGTTGACGGAGGGAAGAGTGGGGTGGCTCTGATGAAGGTAGCCAAATTAGTGGATGCGTACCTGGCGGAAACTGCCGTGGATGCGAATCTAAGCTTGTCGGAATTCGCTGCGCTCGCCGGAGCTCTCCCTCCACATTCCAGAGCTACAGACGATGGCTTGTACAGAGCCATTGACACTTATCTTAAAGCACATCCAAGGGTATCGAAACAAGAAAGGAAAGGTCTGTGCAAGCTAATAGATTGCAGGAAACTAACCCCAGAAGCGTCACTACACGCAGCTCAGAACGAACGCTTGCCTGTGAGAGCTGTGATCCAAGTGCTGTTCTCGGAGCAGACAAAGCTGACCCGTCACGTGGACTGGAGCGGCTCCTTCGGCATGAGAAGCCCGAACGGCGGGGATTTGCCGGTGAGGTCATTCTCGAAGAGGGAGATGCAGGCGCAGCAGATGGAGATAAGGAAGCTGAAGGAAGACGTGTATAGGCTTCAGAGTCAGTGCAGTGTGATGCAGGTGCAGATGGAGAGGATGATGATGGACAAGAACAAGAATAAGGGTTTGTTCAGATCATGGAAGAAGTTAGGGATTGCTGGGTTTGGTAAGACTGTGAATGTGATGGCTTCTAATTCCGTGGACAAGAACATTCAACGTGCAGAAGATCATGATGATGATGGGTTTGAGATTAGACAGACTCCTTTGGACATCAAAACCAGATCATCGTCCGTCAAACCTCGGACTCCTCACAAGTGGAGGAAATCTATGTCTTGA 1335 0.5041 MFSERNKQSQPEQPMIAKSPSHFSSECWFDDACILDMDYFVKTLSGIKAKGVRADLIGSIIIHYASKWLPELSDGNIDVVSNKPSLTQFQESPESVTASWMKKRFFVETLVGVLPPEKDSIPCNFLLRLLRTANMVGVELNYKSELEKRISWQLDQASLKEIMIPSFSHTCETLLDVELVIRLVKRFVGLDVDGGKSGVALMKVAKLVDAYLAETAVDANLSLSEFAALAGALPPHSRATDDGLYRAIDTYLKAHPRVSKQERKGLCKLIDCRKLTPEASLHAAQNERLPVRAVIQVLFSEQTKLTRHVDWSGSFGMRSPNGGDLPVRSFSKREMQAQQMEIRKLKEDVYRLQSQCSVMQVQMERMMMDKNKNKGLFRSWKKLGIAGFGKTVNVMASNSVDKNIQRAEDHDDDGFEIRQTPLDIKTRSSSVKPRTPHKWRKSMS 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1887 444 PANTHER OS12G0117600 PROTEIN 25 388 IPR043454 -
Prci12g1887 444 MobiDBLite consensus disorder prediction 405 420 - -
Prci12g1887 444 MobiDBLite consensus disorder prediction 405 444 - -
Prci12g1887 444 Pfam NPH3 family 27 280 IPR027356 -
Prci12g1887 444 Coils Coil 328 355 - -
Prci12g1887 444 ProSiteProfiles NPH3 domain profile. 26 304 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1887 Prci-Chr12 36448096 36451504 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1887 25 305 EF-hand Containing Proteins AT3G44820 37.086 2.24e-54 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1887 - - gmx:100777676 595.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g0982 13 8193821 8197698 Prci12g1887 12 36448096 36451504 CCT
Prci12g1887 12 36448096 36451504 Prci12g1887 12 36448096 36451504 ECH