Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0976 ATGCCTTCTCTCTCTGAAGCTTTCAGAGCTCACCCAGTCCACCTTCACCACAAGAACCCTGACTTCCACTCCCTTCAAGAGCTTCCCGACTCCTACGCATGGACTCATCTCGACGATAACAACCTCGCCGCCGATGCCGCATCCGACGACGGCGTCCCGCCAGTGATTGATCTCCATGACCCCAATGCTACTTCGCTCGTAGGCCATGCATGCAAGACCTGGGGTGTGTTCCAGGTCGTCAACCACGGCATCCCAGCCAGTCTTCTTCAAGACATTGAGTCCGCCGGCAAGTCCCTCTTCTCCCTCCCTACTCACCAGAAACTCAAGGCGGCTCGCTCCCCCGACGGCGTCTCAGGTTACGGCCTCGCTCGCATCGCCTCCTTCTTCCCCAAGCTCATGTGGTCCGAAGGTTTCACTATTGTCGGTTCCCCTCTCGACCACTTCCGCCAACTCTGGCCACTTGATTATACCAAATACTGCGATGTTGTCGTGGAGTACGAAGAAGCAATGAAAAAGCTAGCGGAAAAGCTAACATGGCTCGTCCTGGCTTCCTTGGGCATATCAAACCAAGACATCCAATGGGCTGGCCCAAGAGACGGAGGATTGCAAGGGGCCTGTGCTGCTCTCCAACTCAACTCCTATCCGACTTGTCCGGACCCAGATCGGGCCATGGGTCTCGCTGCCCACACCGACTCCACCATCCTCACCATCCTATACCAAAACGCCATCAGTGGTCTGCAGGTTCTAAAGGAAGGGACCGGGTGGGTCACCGTCCCGCCGCTCCCGGGCGGGCTCGTGATCAACATAGGCGACCTGCTCCACATTCTGTCGAACGGGCTTTACCCGAGCGTGTTGCACCGGGTTCTGGTGAACCGGACCCAGCAGAGACTATCTGCGGCGTACCTGTATGGACCCCCGGCGGGAGTGAAGATATCGCCACATCCAAAGGTGGTGGGCCCGAGCAGGCCTCCGCTGTACCGGCCGGTGACATGGCACGAGTACCTGGGCACAAAAGCGAAGCATTTCAACGAGGCACTGTCGTGCGTTCGGGTGTGCGGGCCTAAAAACGCCATGTTTGCTGATGGAAATGACACCCACGGCCACGGTCACAATAATAATAATAACAGCGTACCAGTGGGGTAG 1143 0.5748 MPSLSEAFRAHPVHLHHKNPDFHSLQELPDSYAWTHLDDNNLAADAASDDGVPPVIDLHDPNATSLVGHACKTWGVFQVVNHGIPASLLQDIESAGKSLFSLPTHQKLKAARSPDGVSGYGLARIASFFPKLMWSEGFTIVGSPLDHFRQLWPLDYTKYCDVVVEYEEAMKKLAEKLTWLVLASLGISNQDIQWAGPRDGGLQGACAALQLNSYPTCPDPDRAMGLAAHTDSTILTILYQNAISGLQVLKEGTGWVTVPPLPGGLVINIGDLLHILSNGLYPSVLHRVLVNRTQQRLSAAYLYGPPAGVKISPHPKVVGPSRPPLYRPVTWHEYLGTKAKHFNEALSCVRVCGPKNAMFADGNDTHGHGHNNNNNSVPVG 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0976 380 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 54 335 - -
Prci13g0976 380 FunFam Gibberellin 3-beta-dioxygenase 1 16 337 - -
Prci13g0976 380 Pfam 2OG-Fe(II) oxygenase superfamily 209 305 IPR044861 -
Prci13g0976 380 SUPERFAMILY Clavaminate synthase-like 16 342 - -
Prci13g0976 380 Pfam non-haem dioxygenase in morphine synthesis N-terminal 54 147 IPR026992 -
Prci13g0976 380 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 204 305 IPR005123 -
Prci13g0976 380 Gene3D - 20 336 IPR027443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0976 Prci-Chr13 8133970 8135762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0976 67 334 Glycosyltransferase AT5G59530 30.325 3.63e-36 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0976 K04124 - mnt:21402404 550.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g0976 13 8133970 8135762 Prci12g1901 12 36596521 36598362 CCT
Prci13g0976 13 8133970 8135762 Prci13g0976 13 8133970 8135762 ECH