Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1901 ATGCCTTCTCTCTCTGACGCCTTTCGAAGCCACCCTGTGTTCGCTCACCACAAGCACCCTGACTTCACTTCCCTTCAGGAGCTTCCCGATTCCTACGCATGGTCTTCTTCCGCCTCCGCCGCTGTCGATTCCCTCCACCGTGTCCCCGTCGTTGATCTTGATGACCCTAATGCCTTTTCTTTCATTGGCCGTGCATGCAAATCTTGGGGCGTTTTTCAGGTCGTCAACCACGGCGTCCCCTCCGGCCTCCTCCGTGACATTGAACTCGCCGGTAAGGCCCTCTTCTCTCTTCCTCCCTCTCACAAGCTCCGAGCCGCTCGCTCCCCTGACGGCGTCTCTGGCTATGGCCGCGCTCGCATCTCCTCCTTCTTCCCCAAGCTCATGTGGTCCGAAGGCTTCACTATTGTTGGATCCCCTCTCCACCATTTTCGCCAACTCTGGCCTGATGATTACACTAAATACTGCGATGTTGTCAAGAGATATGAAGAAGCGATGGAAAAGTTAGCGGGAAAGCTAATGTGGCTCCTCATGGCCTCTCTGGGTATATCAAAAGACGACATCCAATGGGCCGGGCCAAGAGCTGATTTCACCGGGGCTTCTGCCGCTTTGCAATTGAACTCCTACCCGACTTGCCCGGACCCGGATCGGGCCATGGGCCTTGCGGCTCACACCGACTCCACCCTCCTGACTATTTTACACCAAAACAACATTAGCGGGTTGCAAGTTTTTCGAGAAGGCACGGGGTGGGTGATGGTGCCACCACTTGCTGGTGCGCTTGTGGTGAACATCGGCGATCTCCTCCACATTTTATCGAACGGCTTATATCCGAGTGTGCTCCACCGGGCAGTAGTGAACCGGACCCGGCAGAGGTTCTCTGTGGCGTATTTATATGGGCCCCCAGGGAATGTGAAGATCTCACCACATGCGAAGCTAGTGGGCCCAAGTCGGCCTGCATTGTATAGGCCGGTGACGTGGAACGAGTACCTTGGGACCAAGGCAAAGCATTTCAACGAAGCACTATCGCGTGTGGAGGTTTGTGCGCCTAAGAGCGGATTGTTTGATGTAACCGAGACTCACAACAGTAGCGTGCAAGTGGGCTAG 1101 0.5531 MPSLSDAFRSHPVFAHHKHPDFTSLQELPDSYAWSSSASAAVDSLHRVPVVDLDDPNAFSFIGRACKSWGVFQVVNHGVPSGLLRDIELAGKALFSLPPSHKLRAARSPDGVSGYGRARISSFFPKLMWSEGFTIVGSPLHHFRQLWPDDYTKYCDVVKRYEEAMEKLAGKLMWLLMASLGISKDDIQWAGPRADFTGASAALQLNSYPTCPDPDRAMGLAAHTDSTLLTILHQNNISGLQVFREGTGWVMVPPLAGALVVNIGDLLHILSNGLYPSVLHRAVVNRTRQRFSVAYLYGPPGNVKISPHAKLVGPSRPALYRPVTWNEYLGTKAKHFNEALSRVEVCAPKSGLFDVTETHNSSVQVG 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1901 366 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 48 329 - -
Prci12g1901 366 Pfam non-haem dioxygenase in morphine synthesis N-terminal 48 149 IPR026992 -
Prci12g1901 366 SUPERFAMILY Clavaminate synthase-like 15 336 - -
Prci12g1901 366 Gene3D - 21 339 IPR027443 -
Prci12g1901 366 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 198 299 IPR005123 -
Prci12g1901 366 Pfam 2OG-Fe(II) oxygenase superfamily 203 299 IPR044861 -
Prci12g1901 366 FunFam Gibberellin 3-beta-dioxygenase 1 16 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1901 Prci-Chr12 36596521 36598362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1901 51 328 Glycosyltransferase AT5G59530 30.000 8.68e-34 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1901 K04124 - jre:108996105 541.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g0976 13 8133970 8135762 Prci12g1901 12 36596521 36598362 CCT
Prci12g1901 12 36596521 36598362 Prci12g1901 12 36596521 36598362 ECH