Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0965 ATGGGTGCTTCTCTGCCCCCTAAAGAGGCCAACCTCTTCAAGCTTATTGTTAAATCTTACGAAACCAAACAATACAAAAAGGGGCTCAAAGCAGCTGATTCCATTTTAAAAAAATTCCCTGATCATGGAGAAACTTTATCAATGAAGGGTTTGACTTTAAATTGCATGGATCGTAAGTCTGAAGCATATGATCTTGTTCGTCAGGGACTAAAGAATGACCTAAAAAGTCATGTTTGCTGGCATGTTTATGGTCTGCTTTATCGATCAGATAGAGAATATAGGGAAGCAATTAAGTGCTACCGAAATGCACTGAAAATAGATCCTGACAATATTGAAATTCTACGTGACCTGTCACTCTTACAGGCTCAAATGCGAGATTTGAGTGGCTTTGTTGAGACAAGACAACAACTTCTGACACTGAAGCCAAATCATCGCATGAACTGGATTGGCTTTGCTGTTGCACACGATTTGAACTCTAATGCGTCCAAGGCTGTTGAAATTCTAGAAGCTTATGAAGGAACATTAGAAGATGATTATCCTCCAGAAAATGAACGTTGTGAGCATGGGGAAATGCTTTTATATAAAATCTCCTTGTTAGAGAAATCAGGATTGCTTGAGAGAGCTCTTGAGGAGTTGCACAAGAAGGAATCAAAAATTGTTGATAAGCTTGCATATAAAGAGCAAGAGGTATCTCTTTTAGTCAAGCTTGGTCGCTTCGGAGAAGGTGAAAAACTGTACCGGGCCTTACTTTCTATGAATCCTGACAATTATAGATACTATGAAGGTCTTCAAAAATGTCTTGGATTATATTTAGATAATGGCCGTTATTCTCTTGATGAGATAGAACGGTTAGATGCATTATACAAATCACTTCGACTGCAGTATAAGTGGTCTTCTGCTGTTAAGAGAATACCCCTTGATTTTCTACAAGGTGAAAAATTTCAAGAGGCAGCAGATAATTATATTAGGCCTCTCCTAACTAAGGGGGTTCCATCCCTGTTCTCTGATCTTTCTCCATTGTACCATCACCCTGGGAAGGCAGACATTTTGGAACGACTTATTCTGGACTTAGAGCATTCAGTTAGGACAAATGGTCAATACCCTGGGAGTTTAGAAAATGAGCCCCCTTCAACTCTCATGTGGATTTTATTTTTATTGGCTCAGCATCATGATAAACTGGGCCAACATGAAATTGCTCTTTCAAAAATTGATGAGGCTATAGAACATACGCCTACTGTTATTGATCTATATTCTGTCAAGAGCCGGATACTGAAGCATGCTGGTGATTTGGCTGCTGCTGCTGCGTTTTCAGATGAAGCTAGATGCATGGATCTTGCTGATCGATATATCAACAGTGAATGTGTTAAGCGCATGCTGCAAGCTGATCAGGTGGCTTTGGCTGAAAAAACTGCTGTCTTGTTCACGAAGGATGGGGATCAGCACAACAATCTCCATGACATGCAGTGCATGTGGTATGAGCTTGCCTCGGGTGAAAGCTATTTCCGTCAAGGTGATCTTGGGCGGGCTCTCAAAAAATTTTTGGCAGTGGAGAAGCATTATGCTGATATTACTGAAGATCAGTTTGATTTCCATTCATACTGCTTAAGAAAAATGACTTTGCGAACTTATGTGGAAATGCTTGCATTTCAAGACAGACTGCACTCACATGACTACTTTCATAAAGCAGCCGCTGGAGCTATCAGATGTTATATAAAATTGTATGATTCTCCTCCAAAGTCTGCAGCTGAGGAGGATGAAGATATGTCCAAGTTGCTTCCATCTCAGAAAAAGAAGATGGGCAAAAACAGAGAAAAGGCAGAAGCGCGAGCTAAGAAAGAGGCAGAAGGAAGGAATGAAGAGTCAAGCACCAGTGGTGTATCAAAATCTGGAAAGCGGCATGTAAAACCTGTTGATCCGGATCCACGGGGTGAAAAGTTGTTGCAGATTGAAGATCCCCTGTCGGAAGCAACAAAATACTTGAAGTTGCTGCAGAAGAACTCGTCTGATTCATTGGAGACACACTTTCTTGCATTTGAATTATATATGAGAAAGCAGAAGATTTTACTTGCCTTTCAGGCTGTGAAGCAGTTGCTGAGATTGGATGCTGAACACCCTGATTCTCATCGTTGCTTGATTAAATTTTTCCATAAAGTGGGGTCCATGAATGCTCCCGTGACTGACAGTGAGAAACTCATATGGAGTGTTTTAGAAGCTGAACGCCCTACCATTAGTCAATTGCATGAGAAATCTCTCTTCGAGGCAAACAACTCTTTCCTTGAAAAACATGAAGATTCTTTGATGCATAGAGCTGCTTTTGCGGAAATGTTGTACATTTTGGATCCCAACAGAAAGAAAGAGGCTGTAGAGTTGATTGAAGTCTTAACCAATGATCTAGTACCAAGAAATGGAGCCCTGGGACCAGTCAAGGAGTGGAAACTTAAAGACTGTGTTGCAGTTCATAAACTTCTTGAAACAGTCCTTGATGAGCAGGATACTGCATCGAGATGGAAAACATGTTGTGCAAAGTGTTTTCCCTATTCTACATATTTTGAGGGCAGCCGTAGCTCTGCCTGTCCTAACTCGATCTTGAATCAGATATGTAAGAATGCTGAAAATGGGAGTCCTAACCTTTCAGTGGGTGCTCAAAATGCAAACTCCATTACATCAAATGGGAATTTAGAGGCATTTAGTAAACTCACCATTGACAAAGTTGAATACGTATATTGGAGCAAACAGAATTTCTTGTCACTTGGTTGGTCATGGAAACCAGGCTAG 2775 0.4076 MGASLPPKEANLFKLIVKSYETKQYKKGLKAADSILKKFPDHGETLSMKGLTLNCMDRKSEAYDLVRQGLKNDLKSHVCWHVYGLLYRSDREYREAIKCYRNALKIDPDNIEILRDLSLLQAQMRDLSGFVETRQQLLTLKPNHRMNWIGFAVAHDLNSNASKAVEILEAYEGTLEDDYPPENERCEHGEMLLYKISLLEKSGLLERALEELHKKESKIVDKLAYKEQEVSLLVKLGRFGEGEKLYRALLSMNPDNYRYYEGLQKCLGLYLDNGRYSLDEIERLDALYKSLRLQYKWSSAVKRIPLDFLQGEKFQEAADNYIRPLLTKGVPSLFSDLSPLYHHPGKADILERLILDLEHSVRTNGQYPGSLENEPPSTLMWILFLLAQHHDKLGQHEIALSKIDEAIEHTPTVIDLYSVKSRILKHAGDLAAAAAFSDEARCMDLADRYINSECVKRMLQADQVALAEKTAVLFTKDGDQHNNLHDMQCMWYELASGESYFRQGDLGRALKKFLAVEKHYADITEDQFDFHSYCLRKMTLRTYVEMLAFQDRLHSHDYFHKAAAGAIRCYIKLYDSPPKSAAEEDEDMSKLLPSQKKKMGKNREKAEARAKKEAEGRNEESSTSGVSKSGKRHVKPVDPDPRGEKLLQIEDPLSEATKYLKLLQKNSSDSLETHFLAFELYMRKQKILLAFQAVKQLLRLDAEHPDSHRCLIKFFHKVGSMNAPVTDSEKLIWSVLEAERPTISQLHEKSLFEANNSFLEKHEDSLMHRAAFAEMLYILDPNRKKEAVELIEVLTNDLVPRNGALGPVKEWKLKDCVAVHKLLETVLDEQDTASRWKTCCAKCFPYSTYFEGSRSSACPNSILNQICKNAENGSPNLSVGAQNANSITSNGNLEAFSKLTIDKVEYVYWSKQNFLSLGWSWKPG 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0965 924 SUPERFAMILY TPR-like 233 450 IPR011990 GO:0005515
Prci13g0965 924 Gene3D - 505 725 - -
Prci13g0965 924 FunFam N-terminal acetyltransferase A, auxiliary subunit 2 503 - -
Prci13g0965 924 SUPERFAMILY TPR-like 81 325 IPR011990 GO:0005515
Prci13g0965 924 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 1 826 - -
Prci13g0965 924 MobiDBLite consensus disorder prediction 580 619 - -
Prci13g0965 924 Pfam N-terminal acetyltransferase A, auxiliary subunit 187 696 IPR021183 -
Prci13g0965 924 ProSiteProfiles TPR repeat profile. 77 110 IPR019734 GO:0005515
Prci13g0965 924 SMART tpr_5 380 413 IPR019734 GO:0005515
Prci13g0965 924 SMART tpr_5 77 110 IPR019734 GO:0005515
Prci13g0965 924 SMART tpr_5 43 76 IPR019734 GO:0005515
Prci13g0965 924 MobiDBLite consensus disorder prediction 631 645 - -
Prci13g0965 924 SUPERFAMILY TPR-like 18 157 IPR011990 GO:0005515
Prci13g0965 924 PIRSF NAT_A 1 818 IPR021183 -
Prci13g0965 924 Gene3D - 2 503 - -
Prci13g0965 924 Pfam TPR repeat 84 123 - -
Prci13g0965 924 MobiDBLite consensus disorder prediction 580 645 - -
Prci13g0965 924 FunFam N-terminal acetyltransferase catalytic subunit (NAT1) 505 725 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0965 Prci-Chr13 7997365 8014855 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0965 K20792 - gmx:100820094 1554.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g0965 13 7997365 8014855 Prci12g1907 12 36684715 36712437 CCT
Prci13g0965 13 7997365 8014855 Prci13g0965 13 7997365 8014855 ECH