Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1907 ATGGAGGGTTTGACATTGAATTGCATGGATCGTAAGTCTGAAGCATACGAGCTTGTTCGTCAAGGACTAAAGAATGACCTCAAAAGTCATGTTTGCTGGCATGTTTATGGTCTTCTTTATCGGTCAGACAGAGAATACAGGGAGGCCATTAAGTGCTACCGCAATGCATTGAAAATAGATCCAGACAATATTGAAATCTTACGTGACCTATCACTTTTACAGGCTCAGATGCGAGATTTAACAGGCTTTGTTGAGACAAGACAACAACTTCTGACTCTTAAGCCAAATCATCGCATGAACTGGATTGGTTTTGCAGTTGCCCATCATTTGAATTCTAATGCGTCCAAGGCAGTAGAAATTCTGGAAGCATATGAAGGTACCTTGGAAGATGATTATCCTCCTGAAAATGAACGGTGTGAGCATGGGGAAATGCTTTTATACAAGATCTCTTTGTTAGAGGAATGTGGATTTCTTGAGAGAGCTCTTGAGGAGTTGCACAAAAAAGAAACCAAAATTGTTGATAAACTTGCATGTAAAGAGCAAGAAGTTTCACTCATAATGAAGCTTGGTCGCTTGCAAGAAGGTGAAAAATTGTATCAGGCACTTTTGTCTATGAACCCTGACAATTATAGATACTATGAAGGACTCCAAAAATGTGTTGGGTTATATTCAAAAGATGGCCGTTATACACCAGATGAAATAGATCGGCTAGATGCTTTGTACAAATCACTTGAGCAGCAGTATAAGTGGTCTTCTGCTGTGAAGAGAATACCACTTGATTTTTTGCAAGGTGACACATTTCGAGAAGCAGCAGAAGATTATATTCGGTCTCGCCTAACTAAGGGAGTTCCATCGCTGTTCTCTGATCTTTCTTCTCTGTACAACGATCCTGGGAAGGCAGATATGTTGGAGCAACTTATTCTTGAGTTGGAGCATTCAATTAGAACAACTGGTCAATACCCTGGAAGAGTGGACAAAGAGCCCCCTTCAACTCTGATGTGGAGTTTGTTCTTATTGGCTCAGCATTTTGATAGGCGGGGCCAATATGAAATTGCTCTTTCTCGAATTGATGAGGCTATAAAGCACACTCCTACTGTCATCGATCTATATTCTGTCAAGAGTCGGATACTGAAGCATGCTGGTGATTTGGCTGCTGCTGCTGCACTTGCAGATGAAGCTAGGTATATGGATCTTGCCGATCGATATATCAATAGTGAATGTGTTAAGCGCATGTTACAGGCTAATCAGGTGGCTTTGGCAGAAAAAACTGCAGTCTTGTTCACAAAAGATGGGGATCAACACAACAACCTCCATGACATGCAGTGCATGTGGTATGAGCTGGCTTCTGGTGAAAGTTATTTTCGCCAAGGTGATCTTGGCCAGGCTTTGAAGAAATTTTTAGCTGTGGAGAAGCATTATGCAGATATTACTGAAGACCAATTTGATTTCCATTCATACTGCTTAAGGAAAATGACTTTGCGAACTTATGTGGAGATGCTTAGATTTCAAGATCGATTGCACTCACATGCATATTTTCACAAGGCAGCTGCTGGATCAATCAGATGTTACCTGAAATTGTATGATTCTCCTTTGAAGTCTACAACTGAGGAGGAGGATGACATGTCAAAGTTGCTTCCTTCTCAGAGAAAGAAATTGAGACAAAAGCAGAGAAAGGCAGAAGCAAGGGCTAAGAAAGAGGCAGAAGAGAAGAATGAAGAGTCAAATGTCAGTGGTGTGCCAAAGTCTGGAAAACGGCATGTGAAACCTTTTGATCCAGATCCACGTGGTGAAAAGTTGTTACAGGCTGAAGATCCACTATTAGAAGCCACAAAATATCTGAAGTTGCTGCTGAAGAGTTCACCCAATTCATTGGAAACACACTTGCTCTCTTTTGAATTGTATATCAGAAAACAGAAGATTTTGCTTGCCTTTCTGGCTGTGAAGCAGTTATTGAGATTGGATGATGAGCACCCTGATTCGCATCGTTGCTTGATTAAATTCTTTCATAAAGTGGGATCCATGGATGTTCCTGTGACTGACAGCGAGAAACTCATTTGGAGTGTCTTAGAAGCTGAGCGCCCAACAATCAGTCAGTTGTACGAGAAGTCCCTGCTCGAGGCAAACAATTCTTTCCTTGAAAAACATAAAGATTCTTTGATGCACAGAGCTGCCGCCGCTGAAATGTTGTGCGCTTTGGATCCAAACAGAAAACCTGAAGCTGTTAAATTGATTGAAGAGTCACCGAGTGACTGTGTGCTAAGAAATGGAGTTATTGGAGCAATTAGGGAATGGAAACTCAAAGATTGCATCGCTGTTCATAAACTCCTAGAGACAGTCCTTGTTGAGCCAGATGCTGCATTGAGATGGAAGGTGCGTTGTAAAGAGCTTTTCCCATATTCTACATACTTTGAGGGCAGCCGTAGTTCTACCTCTCCCAACTCAGCTTACAATCAGATTTGTAATGACTTTGAAAATGGGAGTATTAACCCTTCAATGGATGGCCAAAATGTGGGTTCCTTCACGTTAAATGGGAAACTAGACGCATTTAAAGAGCTTTCCATATTACAAAGTTGA 2574 0.4134 MEGLTLNCMDRKSEAYELVRQGLKNDLKSHVCWHVYGLLYRSDREYREAIKCYRNALKIDPDNIEILRDLSLLQAQMRDLTGFVETRQQLLTLKPNHRMNWIGFAVAHHLNSNASKAVEILEAYEGTLEDDYPPENERCEHGEMLLYKISLLEECGFLERALEELHKKETKIVDKLACKEQEVSLIMKLGRLQEGEKLYQALLSMNPDNYRYYEGLQKCVGLYSKDGRYTPDEIDRLDALYKSLEQQYKWSSAVKRIPLDFLQGDTFREAAEDYIRSRLTKGVPSLFSDLSSLYNDPGKADMLEQLILELEHSIRTTGQYPGRVDKEPPSTLMWSLFLLAQHFDRRGQYEIALSRIDEAIKHTPTVIDLYSVKSRILKHAGDLAAAAALADEARYMDLADRYINSECVKRMLQANQVALAEKTAVLFTKDGDQHNNLHDMQCMWYELASGESYFRQGDLGQALKKFLAVEKHYADITEDQFDFHSYCLRKMTLRTYVEMLRFQDRLHSHAYFHKAAAGSIRCYLKLYDSPLKSTTEEEDDMSKLLPSQRKKLRQKQRKAEARAKKEAEEKNEESNVSGVPKSGKRHVKPFDPDPRGEKLLQAEDPLLEATKYLKLLLKSSPNSLETHLLSFELYIRKQKILLAFLAVKQLLRLDDEHPDSHRCLIKFFHKVGSMDVPVTDSEKLIWSVLEAERPTISQLYEKSLLEANNSFLEKHKDSLMHRAAAAEMLCALDPNRKPEAVKLIEESPSDCVLRNGVIGAIREWKLKDCIAVHKLLETVLVEPDAALRWKVRCKELFPYSTYFEGSRSSTSPNSAYNQICNDFENGSINPSMDGQNVGSFTLNGKLDAFKELSILQS 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1907 857 MobiDBLite consensus disorder prediction 535 595 - -
Prci12g1907 857 ProSiteProfiles TPR repeat profile. 30 63 IPR019734 GO:0005515
Prci12g1907 857 SUPERFAMILY TPR-like 337 674 IPR011990 GO:0005515
Prci12g1907 857 PANTHER N-TERMINAL ACETYLTRANSFERASE-RELATED 1 779 - -
Prci12g1907 857 FunFam N-terminal acetyltransferase catalytic subunit (NAT1) 458 678 - -
Prci12g1907 857 MobiDBLite consensus disorder prediction 559 575 - -
Prci12g1907 857 FunFam N-terminal acetyltransferase A, auxiliary subunit 1 456 - -
Prci12g1907 857 Pfam TPR repeat 37 76 - -
Prci12g1907 857 SUPERFAMILY TPR-like 3 216 IPR011990 GO:0005515
Prci12g1907 857 Pfam N-terminal acetyltransferase A, auxiliary subunit 140 649 IPR021183 -
Prci12g1907 857 Coils Coil 549 573 - -
Prci12g1907 857 Gene3D - 1 456 - -
Prci12g1907 857 Gene3D - 458 677 - -
Prci12g1907 857 PIRSF NAT_A 1 771 IPR021183 -
Prci12g1907 857 SMART tpr_5 30 63 IPR019734 GO:0005515
Prci12g1907 857 SMART tpr_5 333 366 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1907 Prci-Chr12 36684715 36712437 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1907 K20792 - gmx:100793968 1423.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g0965 13 7997365 8014855 Prci12g1907 12 36684715 36712437 CCT
Prci12g1907 12 36684715 36712437 Prci12g1907 12 36684715 36712437 ECH