Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0957 ATGGACCTAATTTCGGGTCTTCCTGACGACATCGCACTCGACTGTTTGAGTCGGGTTTCGTATCAGCAGTTCCCGGCGGTCGCCTCTGTTTGCAAGGCCTGGAAGAACGAGATTCAGACGCCGGAGTTTCGCCGTCGGAGGAAGAGCGCAGGGCATGTCCAGAATATCGTCGTTATGGTTCAGGCACGACTTGACTCGGAGAAATCCGTCTCTGGGGCGATAAAGGGGTCGATGAATATGAACCCGGTTTACCGCCTTACAGTTTGTGAGCCGGAGACCGGTCTCTGGAGCGAGATGCCTCCGATTCCAGGTTTGTCAGGCGGGTTACCTATGTTCTGCCAGATTGCGGGTGTCGGGTTGGATCTGGTTGTGATGGGCGGGTGGGACCCCAGTTCCTGGAAGGCGTCCAATTCGGTGTTTGTCTATAACTTCATTTCGGCGACATGGCGCCGTGGGGCCGACATGCCTGGTGGTCCCAGGACGTTCTTCGGCTGCGCGTCGGATGAGCGCCGCTTCGTTTACGTCGCCGGCGGGCACAACGAGGACAAGAACGCTCTGAGGTCGGCGTTCGCGTATGACGTGGCAAGCGACGAGTGGGTCCCAGTGCCTGACATGGCAAGAGAGCGGGACGAGTGCAAGGCCATCTTCCACAACGGCAAGTTCAGAGTCATCGGAGGGTACTGCACGGAGATGCAAGGCAGGTTCGAGAGGAGCGCTGAGGCGTTCGACGTCGCCACGCGGAGGTGGGACCCTGTGGAGGAGGAGTTCCTATATGCTGCCACGTGTCCGAGGACATGCGTGGACAGCGGAGACGACGAGGAGAAAGTGTACATGTGCGGTACCGGCGGGGAGGTGATGGCCCTCCAGGGAGGCACGTGGCGGTCGGTTGCCAAGTTGGGAGACGAGACCCGCCACGTCGCGTACGTGAGGACGTGGAACGGTAAGATGTTGCTGATAGGATCAAGAGCATACAGTGAACCGCACGTGGGAATTATATTGGATCTGGAAACCGGTCACCAGAGAAAATTGGAAATCCCGCGGAACTACACAGGCCACGTTCAGTCCGGTTGTCTTCTAGAAATTTAA 1086 0.5792 MDLISGLPDDIALDCLSRVSYQQFPAVASVCKAWKNEIQTPEFRRRRKSAGHVQNIVVMVQARLDSEKSVSGAIKGSMNMNPVYRLTVCEPETGLWSEMPPIPGLSGGLPMFCQIAGVGLDLVVMGGWDPSSWKASNSVFVYNFISATWRRGADMPGGPRTFFGCASDERRFVYVAGGHNEDKNALRSAFAYDVASDEWVPVPDMARERDECKAIFHNGKFRVIGGYCTEMQGRFERSAEAFDVATRRWDPVEEEFLYAATCPRTCVDSGDDEEKVYMCGTGGEVMALQGGTWRSVAKLGDETRHVAYVRTWNGKMLLIGSRAYSEPHVGIILDLETGHQRKLEIPRNYTGHVQSGCLLEI 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0957 361 Pfam Kelch motif 173 205 IPR006652 GO:0005515
Prci13g0957 361 Gene3D - 45 344 IPR015915 GO:0005515
Prci13g0957 361 Pfam F-box domain 4 43 IPR001810 GO:0005515
Prci13g0957 361 CDD F-box_AtAFR-like 3 47 - -
Prci13g0957 361 PANTHER OS02G0208700 PROTEIN 2 361 IPR044595 GO:0080037|GO:2000762
Prci13g0957 361 SUPERFAMILY Kelch motif 78 324 IPR015915 GO:0005515
Prci13g0957 361 SMART kelc_smart 172 219 IPR006652 GO:0005515
Prci13g0957 361 SMART kelc_smart 121 169 IPR006652 GO:0005515
Prci13g0957 361 Pfam Kelch motif 110 160 - -
Prci13g0957 361 SUPERFAMILY F-box domain 1 46 IPR036047 GO:0005515
Prci13g0957 361 SMART fbox_2 7 47 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0957 Prci-Chr13 7945775 7947154 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0957 7 199 Miscellaneous Gene Families AT4G33900 24.878 2.57e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0957 - - vum:124828606 499.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g0957 13 7945775 7947154 Prci12g1913 12 36736053 36737450 CCT
Prci13g0957 13 7945775 7947154 Prci13g0957 13 7945775 7947154 ECH