Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci13g0712 ATGGCTTCAGTTAGTGCAGTCAAATTCTTGCTGTGTTTAGTTTTATGGCTCTTCAGCTCTCCAACTCCTTGTCAAGGTGAGAAGAACTGGAATCAAAAGGGGTATCCATTCATCAGAAAGGCAAGCTCATTCTCATCATCTTCATCGATTTCAGCAAAATGGAACAATGATGGGTATGATTATATCATAGTGGGAGGTGGAACTGCAGGATGCCCTCTGGCTGCGACGCTATCAAAGAAATTCAGAGTACTAGTGCTGGAAAGAGGGGGCGTGCCGTTTAACAATCCGAATGTGTCGTTTATGGAGAATTTTCACATTACCTTGGCGGACACTTCTGCAACTTCACCTTCCCAATACTTCATTTCAACTGATGGAGTCCTGAATGCTCGAGCTAGGGTTCTCGGTGGTGGTAGCTCCATTAATGCCGGTTTCTACTCCAGAGCAAGCTCCAGATTTATAAAGAAAGTGGGGTGGGATGCGAGAGTGGTGAACGAGTCATACCCATGGGTCGAGAGGCAAATTGTGTACCGTCCAAAGATCGCACCTTGGCAACGAGCAGTGAGGGATGGCCTTCTGGAAGTTGGCGTTTCTCCTTTCAATGGCTTCACCTTCAATCATGTCCATGGTACCAAGGTCGGGGGCACCATCTTCGACCGTTTTGGCCACCGCCACTCTGCCGCCGAGCTTCTTGCTTCTGCAAACCCTCGAAAGCTCTCTGTTCTCGTCTACGCCACTGTCCACAATATCGTCTTCAACACAAGAGGAAAAAGGCCAAAAGCTGTGGGGGTAATTTTCAAGGATGAAAATGGGAAACAGCATGAGGCGTTTCTGAGGCATAATGGGCACAGTGAGGTGATAGTGTCTTGTGGGGCTATTGGGACACCACAACTGCTGATGCTCAGTGGGATTGGTCCTAAAGAAGAACTTGAAGGCTTGAACATTACGGTGGTGCTTGATAACCCGTATGTTGGGAAGGGCATGGCTGATAACCCCTTGAACACCATTTTTTTACCTTCTAAAAGGCCAGTGAAGCAGTCACTCATAGAAACTGTGGGTGTCACCGACATGGGAGTGTACATTGAGGCTAGCAGTGGTTTTGGTCAGTCCAATGATAGCATCCACTGTCACCATGGTATCTTGTCTGCTGAGATTGGGCAGCTCTCCACAATTCCTCCCCATGAGAGATCACCTGAAGCTGTTCAAGATTATGTCAAAAGTAAGCAAGAAATACCAGTTGAAGCATTCAGGGGAGGCTTCATCCTGTCAAAAGTAGCGAGCCCTTGGTCAATGGGTGAGCTCAAGCTGATCAACACCAATGTGGAAGACAACCCTTCTGTCACCTTCAACTACTTCAACCACCCATATGATGTTCAGCGATGTGTCGAGGGGATTCGAATAGCTGCCAAGGTTGTACAGTCAGATCGATTCACGAACTACACTTTGTGTGACAAAGAAAGTACCAACACACTTCTTAACCTCACAGTGAAGGCTAATGTGAACCTTGTGCCCAAGCATGTCAATGACACAAAGTCATTAGAGCAGTTCTGCAGAGACACTGTGATCACTATTTGGCATTACCATGGTGGATGCCATGTGGGGAGGGTGGTTAGCCATGATTATAAGGTTCTTGGTGTTGATAGACTCCGTGTGGTGGATGGCTCAACGTTTACTGAGTCACCAGGGACTAATCCTCAAGCCACCGTAATGATGATGGGCAGGTACATGGGACTGAAGATTTTAAGAGATAGGTTGGGGAAATCGGCTGGTATATAA 1773 0.4721 MASVSAVKFLLCLVLWLFSSPTPCQGEKNWNQKGYPFIRKASSFSSSSSISAKWNNDGYDYIIVGGGTAGCPLAATLSKKFRVLVLERGGVPFNNPNVSFMENFHITLADTSATSPSQYFISTDGVLNARARVLGGGSSINAGFYSRASSRFIKKVGWDARVVNESYPWVERQIVYRPKIAPWQRAVRDGLLEVGVSPFNGFTFNHVHGTKVGGTIFDRFGHRHSAAELLASANPRKLSVLVYATVHNIVFNTRGKRPKAVGVIFKDENGKQHEAFLRHNGHSEVIVSCGAIGTPQLLMLSGIGPKEELEGLNITVVLDNPYVGKGMADNPLNTIFLPSKRPVKQSLIETVGVTDMGVYIEASSGFGQSNDSIHCHHGILSAEIGQLSTIPPHERSPEAVQDYVKSKQEIPVEAFRGGFILSKVASPWSMGELKLINTNVEDNPSVTFNYFNHPYDVQRCVEGIRIAAKVVQSDRFTNYTLCDKESTNTLLNLTVKANVNLVPKHVNDTKSLEQFCRDTVITIWHYHGGCHVGRVVSHDYKVLGVDRLRVVDGSTFTESPGTNPQATVMMMGRYMGLKILRDRLGKSAGI 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci13g0712 590 Gene3D - 59 572 IPR036188 -
Prci13g0712 590 PIRSF Alcohol_oxidase 37 589 IPR012132 GO:0050660
Prci13g0712 590 ProSitePatterns GMC oxidoreductases signature 2. 290 304 IPR000172 GO:0016614|GO:0050660
Prci13g0712 590 PANTHER OSJNBA0019K04.7 PROTEIN 11 584 - -
Prci13g0712 590 SUPERFAMILY FAD/NAD(P)-binding domain 56 582 IPR036188 -
Prci13g0712 590 Gene3D - 176 522 - -
Prci13g0712 590 SUPERFAMILY FAD-linked reductases, C-terminal domain 327 529 - -
Prci13g0712 590 Pfam GMC oxidoreductase 428 573 IPR007867 GO:0016614
Prci13g0712 590 Pfam GMC oxidoreductase 59 331 IPR000172 GO:0016614|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci13g0712 Prci-Chr13 5892388 5902107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci13g0712 59 583 Miscellaneous Gene Families AT5G51950 52.642 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci13g0712 K15403 - gmx:100784433 939.873
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g0712 13 5892388 5902107 Prci12g2120 12 38622133 38629029 CCT
Prci13g0712 13 5892388 5902107 Prci13g0712 13 5892388 5902107 ECH