Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2120 ATGGCCTATGTTTCTGCAGTCAACTTCTTTCTCTGCTCATTACTCCTCTGCCTCTTCCTCTCTCTCCCTCCTTCACAAGGTAACAAGCAGAACTGGTATACCAAATACAGATATCCATTTCTGAAAAAGGCAAGCTCGTTCTCATCATCATCATCATCAACATCAACCACTCCCAGCAACAATGCTTATGATTATATAATTGTGGGAGGTGGAACTGCGGGCTGCCCTCTGGCTTCAACACTGTCCCAAAACTTTAGGGTTTTGCTTCTTGAAAGAGGGGGCATACCTTTCACAAACCCTAATGTGTCATTTCTGGAGAATTTTCATATCACTTTGGCTGATATTTCACCATCTTCAGCTTCCCAGTACTTCATTTCCACTGATGGTGTTCTTAATGCCAGAGCTAGGGTTTTGGGAGGTGGGAGCTCCATTAATGCTGGCTTCTACACCAGAGCAAGCTCAAGGTTTATAAAGAGAGTGGGGTGGGATGCGAAGGTGGTGAACGAGTCATACGAGTGGGTGGAGAAGCAAATAGTGCATTGGCCTAAGTTCTCCGCGTTTCAGAGAGCAGTAAAGGACAGCCTTCTGGACGTAGGAATCTCTCCTTTCAACGGTTTCACGTATGATCATATTTATGGCACCAAGGTTGGTGGCACCATTTTTGATCGGTTCGGTCGTCGCCACACAGCTGCTGAGCTTCTCGCTTCTGCCAACCCATATAAACTCACTGTTCTCACCTACGCCACCGTCCACAAAATCGTCTTTGATACTAAAGGTAAGAGGCCAAGAGCTGTGGGAGTGATATTCAAAGATGAGAATGGGAAAATCCATCAGGCAAATCTGGGGAATGGAAGGAAGAATGAAGTAATAGTGTCTAGTGGGGCAATTGGGACTCCTCAATTGCTTCTGCTAAGCGGGATTGGCCCAAAAGAGCAGCTCCAGAACTTTAAGATCCCAGTGGTGTTTGATATTTTTGTTGGGAAAGGCATGGCTGATAACCCCATGAACACCATTTTTGTTCCTTCCAATAGACCAGTTCATCAGTCACTCATTGAGACTGTGGGTATTACTAAACGTGGAGTCTACCTAGAAGCTAGCTGTGGGTTTAGTCAGTCCACTGATAGCATTCACTGTCACCATGGAATCTTGTCTGCTGAGATTGGCCAGCTCTCCACAATCCCTCCCAAGCAAAGATCAAGAGAAGCTGTTCTTGCTTTTACCAAGAACAAGCGCAATCTCCCGATTGAAGCATTCAGGGGAGGTTTCATATTGTCAAAAGTGGCCAACCCTTGGTCTGTAGGTGATCTCAAGTTGATCAACACCAATGTAGAAGACAACCCTTCTGTTACCTTCAACTATTTCAGTCACCCACATGATCTCCAACGTTGTGTTGAGGGTATCAGAATAGCCACCAAGGTTGTGCAGTCTGAGCACTTCACAAACTACACCATGTGTGCCCGACAAACCACAGAGAAACTGCTTAACCTCACTGTGAAGGCCAATGTGAACCTCATACCCACACTCAATGACACGCAATCACTGGAGCAGTTTTGCAGAGACACTGTGATCACAATCTGGCACTACCATGGTGGGTGCCACGTGGGCAAGGTTGTTAATTCTGAATATAAGGTTCTTGGAGTTGACAGACTACGTGTGGTGGATGGCTCAACATTTACAGAATCACCAGGGACTAATCCTCAAGCTACTGTCATGATGATGGGCAGGTACATGGGACTGAAGATTTTAGGAGATAGGGTGCGCAAATCAGGTTAG 1773 0.4597 MAYVSAVNFFLCSLLLCLFLSLPPSQGNKQNWYTKYRYPFLKKASSFSSSSSSTSTTPSNNAYDYIIVGGGTAGCPLASTLSQNFRVLLLERGGIPFTNPNVSFLENFHITLADISPSSASQYFISTDGVLNARARVLGGGSSINAGFYTRASSRFIKRVGWDAKVVNESYEWVEKQIVHWPKFSAFQRAVKDSLLDVGISPFNGFTYDHIYGTKVGGTIFDRFGRRHTAAELLASANPYKLTVLTYATVHKIVFDTKGKRPRAVGVIFKDENGKIHQANLGNGRKNEVIVSSGAIGTPQLLLLSGIGPKEQLQNFKIPVVFDNXFVGKGMADNPMNTIFVPSNRPVHQSLIETVGITKRGVYLEASCGFSQSTDSIHCHHGILSAEIGQLSTIPPKQRSREAVLAFTKNKRNLPIEAFRGGFILSKVANPWSVGDLKLINTNVEDNPSVTFNYFSHPHDLQRCVEGIRIATKVVQSEHFTNYTMCARQTTEKLLNLTVKANVNLIPKXLNDTQSLEQFCRDTVITIWHYHGGCHVGKVVNSEYKVLGVDRLRVVDGSTFTESPGTNPQATVMMMGRYMGLKILGDRVRKSG 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2120 592 SUPERFAMILY FAD-linked reductases, C-terminal domain 331 533 - -
Prci12g2120 592 SUPERFAMILY FAD/NAD(P)-binding domain 56 586 IPR036188 -
Prci12g2120 592 PIRSF Alcohol_oxidase 38 592 IPR012132 GO:0050660
Prci12g2120 592 PANTHER OSJNBA0019K04.7 PROTEIN 17 588 - -
Prci12g2120 592 Pfam GMC oxidoreductase 63 165 IPR000172 GO:0016614|GO:0050660
Prci12g2120 592 Pfam GMC oxidoreductase 224 335 IPR000172 GO:0016614|GO:0050660
Prci12g2120 592 ProSitePatterns GMC oxidoreductases signature 2. 294 308 IPR000172 GO:0016614|GO:0050660
Prci12g2120 592 Gene3D - 180 526 - -
Prci12g2120 592 Pfam GMC oxidoreductase 432 577 IPR007867 GO:0016614
Prci12g2120 592 Gene3D - 63 576 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2120 Prci-Chr12 38622133 38629029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2120 43 587 Miscellaneous Gene Families AT5G51950 52.813 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2120 K15403 - gmx:100788704 922.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g0712 13 5892388 5902107 Prci12g2120 12 38622133 38629029 CCT