Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0386 ATGCAGCGACGGAAATCGCTCACATTGAACTGGGACGGTCTCGGAGATGACGATGAAGATGACGACCGCTTCTTCGAGACGCGCGAGCGTATGTCCTCCGCTGCCCCTATCGATCTGGAAGCTTCCTCATCCGACGAAGATGACGGCTTCGAAGACAGCCGCATGTCGTTTAGTGCCAACATGTCCCCCAACAAATCCGAGAGAGTCAAGCCCTTTCCGGTCACCGTTGCCGCCTTGGGATCCGAATACGACATGTGGATCGCATCTCCGGGATCAATCACGGAGCGCAGAAAACGATTACTTCTCGGTATGGGCCTGGACGAGAACAAAGAGGTCCTCAGAATCACAAGCATGGCTCTGGATCGCGCCATTTCGAAGAAATTCGAAAATGACCAAACCGATTGTTCACCTTCAACACCAACAAGTACAAGTAAATCTTCTGCTCCTCATTCATCATCTTCTTCTTCCACTGTAAGTTCGCAATCGGAGGTAAAACATCATAGGAAAAAATCAAGAAAGCCGTCCATTATCCCCTTCGTTCTCGGTCGCTCGCGATCCGAAGGCGACATTGATTCGTTCTCGATGCCAAAATACAGGAAAGAAGAATTCATCGGTAAAATCTCCAAGCAACGCCTGACGAGAACATCTTCGGACTCGACATTTTCTCGTGGCGGTGCTCGTCCGTGCAAAGGAGAATCCCGAGTCGCAGTGAAACATAAGGAAACGCCGGGGCAGTCGCCGCATCACTGCTCGAAGATGACGTCGGTGAAGTCTAACTGGGGATTAGGAGCTTTCTTCTTGATCAAGAATCTGGACACGGGAAAAGAGTTCATCGTCAACGAGTCAAGCGAAGACGGGATGTGGAACAGACTAAGCGATCTGCAAACAGGGAAGAAATTAACAATGGAGGAATTTGAACGACACCTAGGACATTCCCCGGTGGTGAAAGAGCTGATGAGTCGTGACAAAGTGAACAGAAGTACCGGCGACGGTTCTGGATACGATCGGAAGCTCACGACGCAGCATTCGTATTTCTCAAAGAGCTTAAGGAAGAGCAAAAGAACAGGGGCTGCTCTGTTGAAGAACATCAAAGGAGTGGCTTCTGGGATCATCGGGGAGAGAGAGAGAGATGAGACACAGAAGTCGTCATTGTCATCGTCAACACAATTGTCGACGACTTCTGAACAGAAACCCGCGAAGAACGAACAGTGGGTGAGAGTAAGACAGAGTGGGAAATCCATGAAAGAGCTCTCAGCTCTGCATCTGTGTCAAGAATTTCAAGCTCACGAAGGCTGTATCTGGACGATCAGGTTCAGTACAGATGGTCATTACATGGCGAGTTCAGGGGAAGACAAGGTGATTCACGTATGGGAAGTGCAGGAATGCGAGGTCACGTCGATGAAGCCAGATGAGGGAAGTCTCACTCCGATTCATCCATCGTTGCTTGGATCACCAGAACGAAATGGAAAAGAAGAATGGAATGATATGAAGAAGAAAGGGAAGCATGGAAGCAAAAGATCAGGAAGGAGTTTCGCGATTCCTGATTATGTTCACATCCCTGAAACTGTGTTCTCTTTCTCCGAGAAACCTTATTGCTCTTTCCATGGCCATTCCGACGACGTTTTGGACTTGTCCTGGTCAAGATCCCAGCTACTGCTATCATCGTCAATGGATAAAACAGTGAGATTATGGGACATGGAGAGCAGGGCGTGCTTGCAGGTGTTCACCCACAGTGACTATGTAACGTGCGTGCAGTTCAACCCAATGGACGAAGAGTATTTCATTAGTGGGTGTCTGGACACGAAGGTGAGAATTTGGAACATTCCTCAACGCTTCGTGGTGGATTGGATCGATACTCACGAAATGGTCACTGCTATTTCTTACACTCCTGACGCTCAAGCTGCTTTTGTCGGTACTCATAACGGAAGCTGTCGCTTGTATAGCACGGAAGATTGCAAAATAAGTCAAATAGGCGCAGTTGAGCTTAGGCGAAAGAAGAAATCTCATTTAAGAAAGGTGACTGGTTTTCAGTTTGCTCCAAGTAATCCATCAGAAGTGCTTGTTACTTCAGCTGATTCCAGGATCAGAATTGTAGAAAATTCCAGAGTTGTTCATAAGTTTGTAGGATTTCGAAATGCAAATAGCCAAATATCAGCTTCATTTAGTCCAAATGGAAGATACGTGATAAGTGCAAGTGAAGATTCACAAGTATATGTGTGGAAGAATGAAGGCCATGCAAAAGCCAGAAACCTAATTCTGACTCAATCCCACGAGCAATTCCAATGCAGAGACGTCTCCATAGCAATCCCATGGCCTCGCACTATCAAGGGTGACCCTCCCATAGGACCATCCCTCCATTCAAAAAGACACCCTAAACACTATCCAGCTCCTCCATCTTCTTCCTGTGGATCTCCACTTCATCCTTCTTCTAAGCCAACACTTTTGCCTCCTCTTCCCAATAAGATCAAGAGAAACAACCAAAACCAGGCCTCTGATAACGCTTCTCCTTCCTGGGATGACGAGCCCTCAGGGATTTCAGGTACAATGTCTGGGATTGGAGCTATTTCGTTTGCTCATAGTGGGAGTAAGAGTAGGTGGTCTCCATTTTCTAGGAATAAGAGTAGTAGTAGTAGTAATGGTCACCATGTCGTTGTGGAAGAGGAAGAACCTACAGCGATCTCTCGCACTGGTTCTGGAATTGGGGATTCGTTTTCTTCTTCTGACTCTGCTTCCATGAGGTATGGCGACTCACCTACCATGTCTGCTTCTGCTAGATCATCATCATCTTCTTCTTCTTGGTCAATGTACTTTGATAATGGTCATGCCAATAGCTCAAGCTCTCATGCTTCAGCATGGGGGTTGGTGATTGTAACAGCTGGGTTTGGAGGTGAAATTAGGTGTTATCAAAATTTTGGGTTGCCTAGAAAGGTATGA 2934 0.4697 MQRRKSLTLNWDGLGDDDEDDDRFFETRERMSSAAPIDLEASSSDEDDGFEDSRMSFSANMSPNKSERVKPFPVTVAALGSEYDMWIASPGSITERRKRLLLGMGLDENKEVLRITSMALDRAISKKFENDQTDCSPSTPTSTSKSSAPHSSSSSSTVSSQSEVKHHRKKSRKPSIIPFVLGRSRSEGDIDSFSMPKYRKEEFIGKISKQRLTRTSSDSTFSRGGARPCKGESRVAVKHKETPGQSPHHCSKMTSVKSNWGLGAFFLIKNLDTGKEFIVNESSEDGMWNRLSDLQTGKKLTMEEFERHLGHSPVVKELMSRDKVNRSTGDGSGYDRKLTTQHSYFSKSLRKSKRTGAALLKNIKGVASGIIGERERDETQKSSLSSSTQLSTTSEQKPAKNEQWVRVRQSGKSMKELSALHLCQEFQAHEGCIWTIRFSTDGHYMASSGEDKVIHVWEVQECEVTSMKPDEGSLTPIHPSLLGSPERNGKEEWNDMKKKGKHGSKRSGRSFAIPDYVHIPETVFSFSEKPYCSFHGHSDDVLDLSWSRSQLLLSSSMDKTVRLWDMESRACLQVFTHSDYVTCVQFNPMDEEYFISGCLDTKVRIWNIPQRFVVDWIDTHEMVTAISYTPDAQAAFVGTHNGSCRLYSTEDCKISQIGAVELRRKKKSHLRKVTGFQFAPSNPSEVLVTSADSRIRIVENSRVVHKFVGFRNANSQISASFSPNGRYVISASEDSQVYVWKNEGHAKARNLILTQSHEQFQCRDVSIAIPWPRTIKGDPPIGPSLHSKRHPKHYPAPPSSSCGSPLHPSSKPTLLPPLPNKIKRNNQNQASDNASPSWDDEPSGISGTMSGIGAISFAHSGSKSRWSPFSRNKSSSSSNGHHVVVEEEEPTAISRTGSGIGDSFSSSDSASMRYGDSPTMSASARSSSSSSSWSMYFDNGHANSSSSHASAWGLVIVTAGFGGEIRCYQNFGLPRKV 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0386 977 ProSiteProfiles Trp-Asp (WD) repeats profile. 574 608 IPR001680 GO:0005515
Prci12g0386 977 MobiDBLite consensus disorder prediction 371 407 - -
Prci12g0386 977 ProSitePatterns Trp-Asp (WD) repeats signature. 552 566 IPR019775 -
Prci12g0386 977 MobiDBLite consensus disorder prediction 468 507 - -
Prci12g0386 977 ProSitePatterns Trp-Asp (WD) repeats signature. 445 459 IPR019775 -
Prci12g0386 977 MobiDBLite consensus disorder prediction 130 161 - -
Prci12g0386 977 MobiDBLite consensus disorder prediction 382 400 - -
Prci12g0386 977 ProSiteProfiles Trp-Asp (WD) repeats profile. 718 741 IPR001680 GO:0005515
Prci12g0386 977 PRINTS G protein beta WD-40 repeat signature 594 608 IPR020472 -
Prci12g0386 977 PRINTS G protein beta WD-40 repeat signature 552 566 IPR020472 -
Prci12g0386 977 PRINTS G protein beta WD-40 repeat signature 445 459 IPR020472 -
Prci12g0386 977 MobiDBLite consensus disorder prediction 129 180 - -
Prci12g0386 977 Pfam WD domain, G-beta repeat 530 565 IPR001680 GO:0005515
Prci12g0386 977 Pfam WD domain, G-beta repeat 705 741 IPR001680 GO:0005515
Prci12g0386 977 Pfam WD domain, G-beta repeat 424 457 IPR001680 GO:0005515
Prci12g0386 977 Pfam WD domain, G-beta repeat 570 607 IPR001680 GO:0005515
Prci12g0386 977 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 426 460 - -
Prci12g0386 977 SMART WD40_4 610 648 IPR001680 GO:0005515
Prci12g0386 977 SMART WD40_4 700 741 IPR001680 GO:0005515
Prci12g0386 977 SMART WD40_4 419 458 IPR001680 GO:0005515
Prci12g0386 977 SMART WD40_4 568 607 IPR001680 GO:0005515
Prci12g0386 977 SMART WD40_4 527 565 IPR001680 GO:0005515
Prci12g0386 977 SMART WD40_4 659 699 IPR001680 GO:0005515
Prci12g0386 977 MobiDBLite consensus disorder prediction 820 881 - -
Prci12g0386 977 SUPERFAMILY WD40 repeat-like 420 744 IPR036322 GO:0005515
Prci12g0386 977 ProSiteProfiles Trp-Asp (WD) repeats profile. 426 467 IPR001680 GO:0005515
Prci12g0386 977 MobiDBLite consensus disorder prediction 1 68 - -
Prci12g0386 977 ProSiteProfiles Trp-Asp (WD) repeats profile. 534 574 IPR001680 GO:0005515
Prci12g0386 977 Gene3D - 410 767 IPR015943 GO:0005515
Prci12g0386 977 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 574 608 - -
Prci12g0386 977 MobiDBLite consensus disorder prediction 773 925 - -
Prci12g0386 977 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 534 568 - -
Prci12g0386 977 PANTHER WD REPEAT DOMAIN 44 17 974 IPR040324 -
Prci12g0386 977 MobiDBLite consensus disorder prediction 896 925 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0386 Prci-Chr12 3361480 3368007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0386 533 741 Miscellaneous Gene Families AT5G08390 24.186 4.34e-12 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0386 K20241 - qsa:O6P43_026546 944.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g2571 13 39824812 39829902 Prci12g0386 12 3361480 3368007 CCT