Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0198 TTTCCTTCGCTCCACTTTCAGCAAGTCCGATACTGGCTTATCTCCTTTGTGCTTCGTACTAAACCGAAGCATGAGAGAGGAAAAACTCTCTCTCACAACGCGAAAAATTCCAAACCTCACAAATCTTTAAATTATGCCGTTGATCCTGACCACAATGAGCCATTTTGGAAGAAGACCACCCTCAGTTTCGCCACCGCGGATTATGGCGCTCGTGGTTCCCGCGGTGACGATTACAAATTCGCCTGTGTTTCGATAGCTGAGAGGAAAGCTGATAAAGAATTCATGCCGACCCTGGCTCAGCTACTGAAGCATCCGCTGGCCATCGTCGCATTCGTTCCCAAAGATGTTGCCCTTTTCTTTGCCGGGGCCATTGCCGGTGCTGCTTCGAAGACTGTCACAGCTCCGCTGGATCGCATCAAGTTCCTAATGCAGACTCACGGAGTACGGGTCGGGCAAGAAAGTGCTAAGAAGGCATTTGGTTTCATTGAGGCTATAACAGTTATAGGGAAGGAAGAAGGCATCAGGGGTTACTGGAAGGGCAGCCTCCCCCAGGTGATTTGGATCATACCTTATAGTGCTGTCCAGCTTTTTGCTTATGAAAACTACAAGAAAATATTCAGGGGAAAGAATGGTGAGCTTTCTGTTTTTGGAAGACTCGCTGCAGGTGCTTTTGCAGGCATGACATCCACTTTCGTAACATACCCATTAGATGTCTTGAGATTACGAATAGCTGTTGAACCTGGTTACCGATCAATGACAGGGGTTTCCTTGGGCATGTTAAGAGGCGAAGGACTTGCATCTTTCTACAAGGGGTTGGGGCCTTCTCTAATTGCAATAGCTCCTTACATTGCTGTCAATTTCTGTGTTTTTGACTTATTAAAGAAGTCTTTGCCTGATAAATATCAGAAGAGAACTGAAATCTCACTACTAACAGCTGTTCTTTCAACTTCTCTTGCCACGCTGACATCATACCCTCTAGACACTATGCGAAGACAGATGCAAATTAAGGGTACACCTTACAAGACAGTTGTAGATGCTCTTTCAGGTATTATCGAACGGGATGGAGCTATAGGGTTGTACCGGGGTTTTCTGCCCAATGCCTTGAAAAACTTCCCAACCAGCAGCATCAGGCTTACTACATATGACATTGTTCAACGCCTAATTGCAGCAAGTGAGGAAGAGTTTCAAACAATCACTGAGGAAAATCGCAAGAAACAAACAAATTCCAAGACTTATTGA 1239 0.4536 FPSLHFQQVRYWLISFVLRTKPKHERGKTLSHNAKNSKPHKSLNYAVDPDHNEPFWKKTTLSFATADYGARGSRGDDYKFACVSIAERKADKEFMPTLAQLLKHPLAIVAFVPKDVALFFAGAIAGAASKTVTAPLDRIKFLMQTHGVRVGQESAKKAFGFIEAITVIGKEEGIRGYWKGSLPQVIWIIPYSAVQLFAYENYKKIFRGKNGELSVFGRLAAGAFAGMTSTFVTYPLDVLRLRIAVEPGYRSMTGVSLGMLRGEGLASFYKGLGPSLIAIAPYIAVNFCVFDLLKKSLPDKYQKRTEISLLTAVLSTSLATLTSYPLDTMRRQMQIKGTPYKTVVDALSGIIERDGAIGLYRGFLPNALKNFPTSSIRLTTYDIVQRLIAASEEEFQTITEENRKKQTNSKTY 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0198 412 Gene3D Mitochondrial carrier domain 115 388 IPR023395 -
Prci12g0198 412 PANTHER SOLUTE CARRIER FAMILY 25 100 388 - -
Prci12g0198 412 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 296 IPR018108 -
Prci12g0198 412 FunFam Envelope ADP,ATP carrier protein 115 393 - -
Prci12g0198 412 Pfam Mitochondrial carrier protein 308 389 IPR018108 -
Prci12g0198 412 Pfam Mitochondrial carrier protein 212 299 IPR018108 -
Prci12g0198 412 Pfam Mitochondrial carrier protein 118 209 IPR018108 -
Prci12g0198 412 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 205 IPR018108 -
Prci12g0198 412 SUPERFAMILY Mitochondrial carrier 116 383 IPR023395 -
Prci12g0198 412 PRINTS Mitochondrial carrier protein signature 118 131 IPR002067 GO:0055085
Prci12g0198 412 PRINTS Mitochondrial carrier protein signature 269 287 IPR002067 GO:0055085
Prci12g0198 412 PRINTS Mitochondrial carrier protein signature 312 334 IPR002067 GO:0055085
Prci12g0198 412 PRINTS Mitochondrial carrier protein signature 228 246 IPR002067 GO:0055085
Prci12g0198 412 PRINTS Mitochondrial carrier protein signature 180 200 IPR002067 GO:0055085
Prci12g0198 412 PRINTS Mitochondrial carrier protein signature 131 145 IPR002067 GO:0055085
Prci12g0198 412 Coils Coil 388 408 - -
Prci12g0198 412 ProSiteProfiles Solute carrier (Solcar) repeat profile. 303 387 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0198 Prci-Chr12 1482648 1493333 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0198 53 405 Organic Solute Cotransporters AT3G51870 66.856 1.73e-171 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0198 K14684 - gmx:100796878 523.087
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g0198 12 1482648 1493333 Prci13g2401 13 38449858 38455757 CCT