Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g0083 ATGGATTCCTCCTCTTCTCCCATGCCCGTCCGGGACCTTCCAGAAGCTTCCCCGAAACCTTACAAGAAAAATTTCGTCACAACTTTAATGGAGGCAGCCACTCTTCGGACTCCTTCCTTCAAAGAAGATACCTACTTCATTTCCCACCTGAAATCTTCCGAGAAGAAGGCTCTTCAGGAGCTCAAGGAAAAGCTCAAGGCCTCTGATTCCTCTGAATGTTCCATGTGGGGTGTTTCACTTCTTGGAGGTGACGAAAAATCTGATGTCATTCTCTTGAAATTTCTGAGAGCCAGAGATTTCAGAGTCGGAGATGCTCTTAACATGCTTCTGGAATGCTTGGCTTGGAGAGAGGAGTTTGGTGCAAACGACATCGTTGAGGAGGACTTGGGGTTCAAAGAGCTCGAAGGGGTTATAGCCTATATGCACGGGCATGACAGAGAGGGACGCCCTGTGTGCTACAATGCTTACGGGCTTTTCAAAGATAAAGAAATGTACGAAAGAATATTCGGTGACGAGGAGAAGCTTAAGAAATTTCTGAGATGGAGAGTGCAAGTTTTAGAGAGAGGTATTAAGCTTCTTCATTTCAAGCCTGGTGGGGTCAATTCTATTATTCAAGTTACTGATCTTAAGGACATGCCTAAGAGAGAGCTTAGACTGGCTTCTAATCAGATCCTCAATCTGTTCCAAGACAATTACCCAGAAATGGTGGCTCGTAAGATTTTCATCAATGTCCCGTGGTACTTCAGCATGTTGTATTCAATGTTCAGTCCTTTTGTGACCCAACGAACTAAGAACAAATTTGTGATCTCTAAGGAAGGAAATGCTGCGGAGACACTCTACAAATTTATAAGGCCCGAGGATATTCCAGTCCAGTACGGAGGGCTGTGCAGCCCCATTGATTTGCAGAATGGTCCCCCAAAACCTGCATCTGAGTTTACTGTAAAAGGAGGGGAGAAAGTGAACATACAAATAGAAGGAATTGAGGCGGGAGCAACAATCACATGGGATATAGTGGTAGGAGGGTGGGACTTGGAGTACAGTGCTGAGTTTGTGCCAAGTGCAGAAGGAAGCTACATGATAGCATTAGAGAAGGCGAGGAAGATGGGGCCATCAGAAGAAGCAATACACAATTCATTCACATCAAGAGAAGCAGGCAAGTTGGTACTGTCTGTGGATAACAGCGGCTCTCGCAGGAAAAAAGCTGCTGCATATCGCTACGTGGTGCGCAAATGCAGCCCCAACTAA 1245 0.4562 MDSSSSPMPVRDLPEASPKPYKKNFVTTLMEAATLRTPSFKEDTYFISHLKSSEKKALQELKEKLKASDSSECSMWGVSLLGGDEKSDVILLKFLRARDFRVGDALNMLLECLAWREEFGANDIVEEDLGFKELEGVIAYMHGHDREGRPVCYNAYGLFKDKEMYERIFGDEEKLKKFLRWRVQVLERGIKLLHFKPGGVNSIIQVTDLKDMPKRELRLASNQILNLFQDNYPEMVARKIFINVPWYFSMLYSMFSPFVTQRTKNKFVISKEGNAAETLYKFIRPEDIPVQYGGLCSPIDLQNGPPKPASEFTVKGGEKVNIQIEGIEAGATITWDIVVGGWDLEYSAEFVPSAEGSYMIALEKARKMGPSEEAIHNSFTSREAGKLVLSVDNSGSRRKKAAAYRYVVRKCSPN 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g0083 414 ProSiteProfiles GOLD domain profile. 276 410 IPR009038 -
Prci12g0083 414 MobiDBLite consensus disorder prediction 1 20 - -
Prci12g0083 414 SMART CRAL_TRIO_N_2 87 112 IPR011074 -
Prci12g0083 414 Pfam CRAL/TRIO domain 135 294 IPR001251 -
Prci12g0083 414 PANTHER PATELLIN-1 32 410 IPR044834 GO:0008289
Prci12g0083 414 Gene3D - 126 306 IPR036865 -
Prci12g0083 414 CDD SEC14 131 295 IPR001251 -
Prci12g0083 414 FunFam SEC14 cytosolic factor family protein 46 118 - -
Prci12g0083 414 Gene3D - 46 118 - -
Prci12g0083 414 Gene3D GOLD domain 307 408 - -
Prci12g0083 414 SUPERFAMILY CRAL/TRIO domain 132 299 IPR036865 -
Prci12g0083 414 SMART sec14_4 133 297 IPR001251 -
Prci12g0083 414 Pfam CRAL/TRIO, N-terminal domain 57 110 IPR011074 -
Prci12g0083 414 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 126 300 IPR001251 -
Prci12g0083 414 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 311 408 IPR036598 -
Prci12g0083 414 SUPERFAMILY CRAL/TRIO N-terminal domain 40 128 IPR036273 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g0083 Prci-Chr12 726869 729469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g0083 91 289 Acyl Lipid Metabolism Gene Families AT1G55840 29.952 2.79e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g0083 - - tcc:18597447 701.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g2312 13 37572144 37575279 Prci12g0083 12 726869 729469 CCT