Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci10g0713 ATGGCAGTTCAAGCTCAATACCCATCCAATATTCTCCTCCTCAACAGAAACGAACAGGAGGGACATGATTATTCGTTGCAGCCACACCCAGGAGGGCTCCTTGATCAGTCCCATATCTTTTTCAACAATGGAGGTACTAATTCTCGCAAGAGAGGAAGAGAAGCAGCGGCAGCCACCTGCGTCGCCCAAACAGCCCCTAACGGTGTTAATCTCTTCTCTTTGCAATCCCAGCCTCCTCAGCTCGTCGAACTCTCTCAGCTCCACAACCACCAACCAAATGTGGTCTCCACAGGCCTCCGATTGTCCTTCGGCGACCATCAACAACAGCAACAGCAACAACAAAGACTACAATTACAGCAACAACGCCAAAGCCAACAACAACATCAACAAGCCTGTCAGCCCTATGCTTTCTTATCTCTATTATCGGAAGGATTTGCCTCCCAAATCAAACAACAGCGCGATGAGATTGATCAATTTCTCCAAGCCCAGGGAGAACAATTGCGAAGAGCATTAGCCGAGAAGAGGCAGAGGCATTATCGTGCACTTCTAAGCGTGGCGGAAGAATCAGTGGCCCGGCAGTTGAGAGAGAAGGAGGTTGAGATGGAAAAGGCAACGCGCAGGAATGCCGAGTTAGAAGCGCGCGCGGCGCAACTTACCGTGGAGGCGCAGGTTTGGCAGGCGAAGGCGAAGGCGCAGGAGGCGACGGCGGCGTCTCTGCAAGCGCAACTGCAACAGGCTATGTTGAGCGCGGGTGCGCAGGATAGAGTGGGAGGGTGTTTCGGGGAGGACGGAGGGCTATCCTGCGCGGCGGGCGCCGGGCCAGGCCAACCGGAGGACGCCGAGTCAGCGTATATTGACCCGGACAGGGTCGTGGCATCGGGACCAAAATGCAGAGGCTGTGGGACGCGACTGGCATCGTTGGTGGCATGGCCGTGTCGGCACTTATGCATCTGTCCGGAATGCGATGCGCATTTCCAAGCGTGTCCCGTATGCCTCGCCGTCATCAATTCAACCGTTGAAGTCTTTCTCTCTTAG 1035 0.5488 MAVQAQYPSNILLLNRNEQEGHDYSLQPHPGGLLDQSHIFFNNGGTNSRKRGREAAAATCVAQTAPNGVNLFSLQSQPPQLVELSQLHNHQPNVVSTGLRLSFGDHQQQQQQQQRLQLQQQRQSQQQHQQACQPYAFLSLLSEGFASQIKQQRDEIDQFLQAQGEQLRRALAEKRQRHYRALLSVAEESVARQLREKEVEMEKATRRNAELEARAAQLTVEAQVWQAKAKAQEATAASLQAQLQQAMLSAGAQDRVGGCFGEDGGLSCAAGAGPGQPEDAESAYIDPDRVVASGPKCRGCGTRLASLVAWPCRHLCICPECDAHFQACPVCLAVINSTVEVFLS 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci10g0713 344 ProSiteProfiles Zinc finger RING-type profile. 297 331 IPR001841 -
Prci10g0713 344 FunFam probable BOI-related E3 ubiquitin-protein ligase 2 279 343 - -
Prci10g0713 344 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 280 344 IPR013083 -
Prci10g0713 344 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 42 341 IPR017066 -
Prci10g0713 344 MobiDBLite consensus disorder prediction 21 50 - -
Prci10g0713 344 Coils Coil 187 249 - -
Prci10g0713 344 PIRSF SBP1_RNase_bind 1 344 IPR017066 -
Prci10g0713 344 Pfam Zinc finger, C3HC4 type (RING finger) 296 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci10g0713 Prci-Chr10 4883157 4885717 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci10g0713 K19042 - qsa:O6P43_024439 414.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci10g0713 10 4883157 4885717 Prci5g0432 5 5679995 5681681 CCT
Prci10g0713 10 4883157 4885717 Prci10g0713 10 4883157 4885717 ECH