Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01612 ATGTTTCTTAGTTTTACATGGATTCGCTCTAAGTCAATCCTAGCAAATCTAAAATCACTTTTGGCTCAGAAACAGCAACAGAAGAAGGAAATGAAAGGCCAAAAACAGCTAAAAATCTCTAAGGTTGTGAAAATTGACTCAAGAAAATCATGGGAACACCACATCACTGATGCTACCAATAAAGGGTTCCCTGTTATGGTTCATTTTTCTGCTTATTGGTGCACACCCTCTATAGCTATGAATCCTTTCTTTCAAGAACTGGCTTCCACCTATCCAAAAGTTCTCTTTCTTGATGTGGATGTTGATGAGGTCAAGGAAGTTGGTTCCGAGATGGAAATCAAAGCCATTCCTACCTTTCTGCTGATGAATGGAGGAGCTCCAGTGGACAAAATTGTGGGTGCAAACCCTGATGAGTTAAGGAAAAGGATGAATTATTTTATTATCCAGAAAAATTCCCCCCAGCCAATGTGA 471 0.3949 MFLSFTWIRSKSILANLKSLLAQKQQQKKEMKGQKQLKISKVVKIDSRKSWEHHITDATNKGFPVMVHFSAYWCTPSIAMNPFFQELASTYPKVLFLDVDVDEVKEVGSEMEIKAIPTFLLMNGGAPVDKIVGANPDELRKRMNYFIIQKNSPQPM 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01612 156 CDD TRX_family 49 144 - -
Phco9g01612 156 Coils Coil 14 37 - -
Phco9g01612 156 Gene3D Glutaredoxin 18 151 - -
Phco9g01612 156 Pfam Thioredoxin 45 143 IPR013766 -
Phco9g01612 156 PANTHER THIOREDOXIN 42 143 - -
Phco9g01612 156 SUPERFAMILY Thioredoxin-like 26 147 IPR036249 -
Phco9g01612 156 ProSiteProfiles Thioredoxin domain profile. 20 148 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01612 Phco-Chr9 37842618 37847451 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01612 9 37842618 37847451 Phco9g01612 9 37842618 37847451 ECH
Phco10g01028 10 30766601 30768732 Phco9g01612 9 37842618 37847451 PCT