Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01028 ATGAATGTAAGCATTTGTATTTGTATAAACCTTTCAAAGAAGCAACAGAAGCAGAGAGAAATGGAGGACAAACAGAAGCTCAAAAAATCCAAGGTTATCAAAATAGACTCACAAAAATCATGGGAACACTACATCTCTCAGGCCACCAATCAAAAGTACTCTGTTGTGGTTCATTTCTCTGCTTTCTGGTGTGTGCCTTCTATAGTAATGAATCCTGTTTTTGAAGAACTTGCCTCCACTTATCCAGATGTTCTGTTTCTGACATTGGATGTGGATGAGGTTAAGGAAATTGCCTCCAAGATGGAAATCAAAGCCATGCCCACTTTTCTGTTGCTGAGTGGAGGAACTCCTGTGGAAAAAATTGTGGGTGCAAATCCTGATGAAATAAGGAAAAGGATTGATCATTTTGTTCACTCAAGTCTTTCATACAAATCTGAGTGA 441 0.3855 MNVSICICINLSKKQQKQREMEDKQKLKKSKVIKIDSQKSWEHYISQATNQKYSVVVHFSAFWCVPSIVMNPVFEELASTYPDVLFLTLDVDEVKEIASKMEIKAMPTFLLLSGGTPVEKIVGANPDEIRKRIDHFVHSSLSYKSE 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01028 146 CDD TRX_family 55 134 - -
Phco10g01028 146 Gene3D Glutaredoxin 6 142 - -
Phco10g01028 146 FunFam Thioredoxin 27 138 - -
Phco10g01028 146 SUPERFAMILY Thioredoxin-like 24 137 IPR036249 -
Phco10g01028 146 ProSiteProfiles Thioredoxin domain profile. 21 138 IPR013766 -
Phco10g01028 146 Pfam Thioredoxin 36 134 IPR013766 -
Phco10g01028 146 PANTHER THIOREDOXIN 32 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01028 Phco-Chr10 30766601 30768732 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01028 10 30766601 30768732 Phco10g01028 10 30766601 30768732 ECH
Phco10g01028 10 30766601 30768732 Phco9g01612 9 37842618 37847451 PCT