Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01609 ATGTTGCTGCAGATATCACCAAGTTTGAGGCATGTCACTGTGCTTCCGGGAAAAGGGTTGAAGGAGTTTATCAAAGTGAAGGTTGCATCAAGGAGGCTATCTTATCGGATGCTCTTCTATTCACTCTTGTTCTTCACATTCCTTCTCAGGTTTGTGTTTGTTCTGACAGCAGTGGATAACATTGATGGAGAAAACAAGTGCTCTTCCATAGGTTGCCTGGGAAAAAAATTGAGGCCAAAGATTTTGGGAAGAAGTCTTGAATCAAATGTTCCAGAAGTAATATACGGAATATTAGATCAACCCCTTGGCAAAGATGAATTAGAGCAAAGGACTGATATACCTCAGACTTTAGAAGAGTTCATGATCCAAGTAAAGGAAGGTGGATATGATCCCAAGACATTTGCAATTAAACTAAGAGAAATGGTGACCCTTATGGAACAAAGGACCAGAGAAGCCAAAGTCCAAGAGTATTTATATCGTCATGTAGCATCAAGCAGCATACCGAAACAGCTTCACTGCCTTGGCTTGAAGCTGGCCAATGAGCACACCAACAATGCAGCTGCACGCCTTCAGCTGCCCTCTGCAGAACTTGTCCCTGCTCTGGTTGACAACAATTACTTTCACTTTGTTCTGGCATCCGACAATGTTCTCGCTGCCTCTGTGGTTGCAACATCACTTGTTCGCAACAGTTTGCGACCTCAGAAAGTTGTTCTGCACATAATTACAGACAGAAAGACTTACTATCCTATGCAGGCTTGGTTCTCCTTGCACCCTTTATCACCTGCCATAATTGAGGTCAAGGCATTGCACCACTTCGATTGGTTTACAAAGGGAAAGGTGCCTGTGCTGGAAGCAATGGAAAAAGATCAAAATGTTAGATCACAGTTTAGAGGAGGATCATCAGCTATTGTTGCAAATACCACTGAGAAGCCTAGAGTAATTGCAGCAAAGCTGCAAGCACTTAGTCCTAAGTATAATTCAGTAATGAATCACATTCGCATACATCTTCCAGAGCTGTTCTCTAGTCTTAACAAGGTGGTCTTCCTTGACGATGACATTGTGATACAAACTGATCTTTCACCTCTGTGGGACATTGAGATGAATGGAAAAGTCAATGGAGCAGTAGAAACATGCAGTGGGGAAGATAAGTATGTTATGTCAAAGAGGTTGAAAAGCTATTTGAACTTCTCCCACCCTTTAATATCCCAAAATTTTGATCCCAATGAATGTGCTTGGGCTTATGGCATCAACATTTTCGACCTTGATGCTTGGAGGAAGACCAATATAAGCTCTACATACCATTACTGGGTTGAGCAGAATATAAAATCAGACCTCAGTTTGTGGCAGCTAGGGACATTACCACCTGGATTAATAGCATTCCATGGTCATGTCCACACTATTGATCCTTTCTGGCACATGCTGGGATTGGGATATCAGGAAAGTACAAGTTTTGCTGATGCTAAGACTGCTGGTGTCATCCATTTCAATGGCAGGGCAAAGCCATGGCTAGATATAGCTTTTCCCCATCTAAGGCCATTGTGGACTAAATATATTGACTTTTCAGACTACTTCATAAAGAGCTGTCATATCAAGGCATTGTAA 1602 0.4207 MLLQISPSLRHVTVLPGKGLKEFIKVKVASRRLSYRMLFYSLLFFTFLLRFVFVLTAVDNIDGENKCSSIGCLGKKLRPKILGRSLESNVPEVIYGILDQPLGKDELEQRTDIPQTLEEFMIQVKEGGYDPKTFAIKLREMVTLMEQRTREAKVQEYLYRHVASSSIPKQLHCLGLKLANEHTNNAAARLQLPSAELVPALVDNNYFHFVLASDNVLAASVVATSLVRNSLRPQKVVLHIITDRKTYYPMQAWFSLHPLSPAIIEVKALHHFDWFTKGKVPVLEAMEKDQNVRSQFRGGSSAIVANTTEKPRVIAAKLQALSPKYNSVMNHIRIHLPELFSSLNKVVFLDDDIVIQTDLSPLWDIEMNGKVNGAVETCSGEDKYVMSKRLKSYLNFSHPLISQNFDPNECAWAYGINIFDLDAWRKTNISSTYHYWVEQNIKSDLSLWQLGTLPPGLIAFHGHVHTIDPFWHMLGLGYQESTSFADAKTAGVIHFNGRAKPWLDIAFPHLRPLWTKYIDFSDYFIKSCHIKAL 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01609 533 CDD GT8_like_1 207 519 - -
Phco9g01609 533 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 84 530 IPR029993 GO:0047262
Phco9g01609 533 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 209 524 IPR029044 -
Phco9g01609 533 Pfam Glycosyl transferase family 8 203 506 IPR002495 GO:0016757
Phco9g01609 533 SUPERFAMILY Nucleotide-diphospho-sugar transferases 208 530 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01609 Phco-Chr9 37788006 37790714 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01609 9 37788006 37790714 Phco9g01609 9 37788006 37790714 ECH
Phco10g01031 10 30791444 30794583 Phco9g01609 9 37788006 37790714 PCT