Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01564 ATGTATCCATGGTTTGCTATGGGGCACCTAACCCCATTTCTCCACCTTGCCAACAAGTTAGCCAAAAGGGGACACAAGATCTCATTCTTCATACCCAAAAGAACACAAGCCAAGTTAGAAAACCTCAACCTTCGCCCAAGTCTCATCACCTTTGTCCCTATCAGTGTTCCTCACGTTGATGGTCTTCCCTGTGGTGCAGAAACTACTTCAGATGTTCCCTCTTCTTTGTTCCCACTTATTGCCTCTGCCATGGATCTAACAGAGAAGGATATTGAACTTCTCCTCCTTGAACTCAAACCACACATTTCCTGCAAGGCATCCCCAGCTAGAAAAAGAGAAGATGACATGAGAAAACCACCTTCAGGGTTTCCTGATTGTTCTATCAAGCTGCATGAACATGAAGTAAGGTTCTTTGCCGCGTCAAGGAAATTGGAGTTTGGCAATGGTATTCTTTTCTATGATCGTATCTCTGTTGGTGCAGACTTGTCAGATTGTATTGGATTCAAAGGTTGCAGAGAAATTGAAGGGCCTTACGTGGATTATCTTGAGACGCAACTTGGTAAGCCTGTTTTGCTTTCAGGTCCTCTTGTGCCTGAGTCATCCAACTCAACTTTGGAAGCAAAATGGGGTGAATGGCTCCGTCGATTCAAGGCAGGTTCAGTGATTTACTGTGCACTTGGAAGTGAAAACTCCTTACAGCAAAACCAATTGAAGGAGTTGGTATTGGGTCTTGAGCTAACAGGAATGCCATTCCTTGCAGCACTTAAGCCCCCTAATGAATTTGACTCTCTTGAGGATGCTCTTCCAAAAGGGTTCAAAGAAAGGGTTCGAGAAAGAGGGGTTGTATATGGAGGGTGGGTGCAGCAACAATTGATCTTGGCACATCCTTCTGTTGGGTGCTTCATAACACATTGTGGTGCAGCTTCTCTAACTGAGGCACTTGTGAACCAGTGTCAGTTGGTGTTGTTGCCTCGCCTTGGTTCTGATTTCATCATCAACGCGAGAACCATGGGTGGAAAATTGAGGGTAGGAGTGGAAGTAGAGAAAGGTGAAGAAGATGGTTTGTTCACCAAGGAAAGTGTCGGCAAAGCTGTGAAAATTGTGATGGATGATGAGAATGAGCTTGGCAGAGAAGTCAGAGCAAATCACAACAAAGTCAGGAACCTTTTACTCAGTGAAAATTTTGAGTCAACTTGTGTTGATGCTTTCTGTCACAAGCTTCATGATATAATCTAA 1236 0.4417 MYPWFAMGHLTPFLHLANKLAKRGHKISFFIPKRTQAKLENLNLRPSLITFVPISVPHVDGLPCGAETTSDVPSSLFPLIASAMDLTEKDIELLLLELKPHISCKASPARKREDDMRKPPSGFPDCSIKLHEHEVRFFAASRKLEFGNGILFYDRISVGADLSDCIGFKGCREIEGPYVDYLETQLGKPVLLSGPLVPESSNSTLEAKWGEWLRRFKAGSVIYCALGSENSLQQNQLKELVLGLELTGMPFLAALKPPNEFDSLEDALPKGFKERVRERGVVYGGWVQQQLILAHPSVGCFITHCGAASLTEALVNQCQLVLLPRLGSDFIINARTMGGKLRVGVEVEKGEEDGLFTKESVGKAVKIVMDDENELGREVRANHNKVRNLLLSENFESTCVDAFCHKLHDII 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01564 411 CDD GT1_Gtf-like 1 372 IPR002213 GO:0008194
Phco9g01564 411 Gene3D Glycogen Phosphorylase B; 1 100 - -
Phco9g01564 411 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 285 372 IPR002213 GO:0008194
Phco9g01564 411 PANTHER GLYCOSYLTRANSFERASE 1 403 - -
Phco9g01564 411 Gene3D Glycogen Phosphorylase B; 201 388 - -
Phco9g01564 411 Gene3D Glycogen Phosphorylase B; 157 200 - -
Phco9g01564 411 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 1 392 - -
Phco9g01564 411 FunFam Glycosyltransferase 208 392 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01564 Phco-Chr9 36472110 36473428 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01564 9 36472110 36473428 Phco9g01564 9 36472110 36473428 ECH
Phco10g01080 10 32089065 32090438 Phco9g01564 9 36472110 36473428 PCT
Phco9g01564 9 36472110 36473428 Phco10g01087 10 32341330 32342772 PCT