Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01080 ATGGATTCTTCTTCTTTGCACATTGCAATGTTTCCATGGTTTGCCATGGGACATTTAACTCCATTTCTCCACCTCTCCAACAAGTTAGCAAAGAGGGGACACAAAATCTCCTTCTTCATCCCCAGAAGAACACAATCCAAGTTAGAGCAATTCAACCTCTTCCCAGATCTCATTACCTTTTTCCCTATCGATGTTCCTCATGTTGAAGGTCTTCCTCATGGTGCAGAAACCACTTCCGATGTGCCTATTTCTTTACAATCACTCCTTATGACAGCTATGGACCGCACTGAGAGGGATATAGAGCTTCTCCTCCTAGATTTAAAGCCGCAAATTGTTTTCTTTGACTTCACATATTGGCTACCAAACATCACTTCTCACTTGGGGATCAAATCCTTTCTATACATCGTTGTTAACCCTGCCACATTATCTTACACTACAGTCCCTCCAAGGATGAACCACAAGGGTAGCTTAACTGAACTTGACCTTATGCAACCCCCTCCTGGTTACCCTGTATCATCTATCAAACTTCAGGCACATGAAGCTAAGTTCCTTGCTTCTGTGAGGAACTTGGAGTTTGGTAGTGGTGTTCTCTTTCATGACCGCATCTATAGAGGTCTAACCTTATCAGATGCAATTGGGTTCAAAGGTTGTAGAGAAATTGAAGGGCCTTTTGTTGACTACCTTGCAGAGCAGTTTGGGAAGTCTGTTCTCCTTTCAGGACCCATCATACCTGAGCCACCTAACACTGTTTTGGAGGAAAAATGGAGAGCATGGCTTGGAAGTTTCAAGGATGATTCTGTGGTTTTCTGTGCCCTTGGGAGTGAATCCAAATTACCACATGGTCAATTCCAAGAATTGTTGTTGGGTCTTGAACTTACAGGACTTCCATTCTTGGCAGTTGTGAAAGTTCCTATTGGGTTTGAGACAGTTGAAGCTGCACTCCCAGAAGGGTTTAAGGAAAGGGTAGAAGGGAGAGGGATTGTCCACAGTGGATGGATACAACAACAGTTGATTTTGGAGCACCCATCAGTGGGTTGCTTCATAACACACTGTGGAACTGGTTCATTAACTGAGGCACTAGTGAATAAGTGTCAAATGGTGTTACTACCACAACTAAATGGTGATCAAATCATTAATGCAAGGATGATGGATAGCAACTTGAAGGTTGGGGTTGAAGTGCATAAGGGTGAGGATGGGTTGGTCACAAAGGAGAGAATAAGCAAAGCAGTGAAAATTGTGATGGATGAAGAGAATGAGGTTGGTAGAGAAGTCAGAAAAAATCACGCAAAATTGAGGAATTTCTTGGTAAGCGATGATTTAGACTCCATTTATGTTGATAACTTCTGTAAAAAACTTCAGGATCTTTTTAAATAA 1374 0.4214 MDSSSLHIAMFPWFAMGHLTPFLHLSNKLAKRGHKISFFIPRRTQSKLEQFNLFPDLITFFPIDVPHVEGLPHGAETTSDVPISLQSLLMTAMDRTERDIELLLLDLKPQIVFFDFTYWLPNITSHLGIKSFLYIVVNPATLSYTTVPPRMNHKGSLTELDLMQPPPGYPVSSIKLQAHEAKFLASVRNLEFGSGVLFHDRIYRGLTLSDAIGFKGCREIEGPFVDYLAEQFGKSVLLSGPIIPEPPNTVLEEKWRAWLGSFKDDSVVFCALGSESKLPHGQFQELLLGLELTGLPFLAVVKVPIGFETVEAALPEGFKERVEGRGIVHSGWIQQQLILEHPSVGCFITHCGTGSLTEALVNKCQMVLLPQLNGDQIINARMMDSNLKVGVEVHKGEDGLVTKERISKAVKIVMDEENEVGREVRKNHAKLRNFLVSDDLDSIYVDNFCKKLQDLFK 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01080 457 FunFam Glycosyltransferase 2 254 - -
Phco10g01080 457 CDD GT1_Gtf-like 6 432 IPR002213 GO:0008194
Phco10g01080 457 Gene3D Glycogen Phosphorylase B; 254 435 - -
Phco10g01080 457 PANTHER GLYCOSYLTRANSFERASE 6 449 - -
Phco10g01080 457 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 4 436 - -
Phco10g01080 457 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 331 417 IPR002213 GO:0008194
Phco10g01080 457 Gene3D Glycogen Phosphorylase B; 2 253 - -
Phco10g01080 457 FunFam Glycosyltransferase 255 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01080 Phco-Chr10 32089065 32090438 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01080 10 32089065 32090438 Phco9g01564 9 36472110 36473428 PCT