Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01501 ATGGCTACCAAAACTCAATTCTATCACATTTCTTTGACATTGCTTTTCTGCATGGCAATCTGGGCTTTTCAAGTCACATCTCGCACTCTCCAAGATGCCTCCATGAATGAGAGGCATGAGGAATGGATGACTCGTTATGACCGAGTGTATAAGGACCCTCAGGAAAGGGAGAAGCGTTTAAGAATATTCAAGGAAAATGTGAACTACATTGAGGCCTTCAACAATGCTGCCAATAAACCTTACAAGCTTGCTGTTAATCAATTTGCAGACCTCACCAATGAGGAGTTCATAGCACCAAGAAATAGGTTCAAGGGTCACATGTGTTCCGCTATCACAAGGACAACCTCTTTTAAGTACGAAAATGTGACTGCAGTGCCTTCCACAGTGGATTGGAGGCAAAAGGGTGCAGTTACACCCGTGAAGGACCAAGGTCAATGTGCATCTAGCCATGCAGCCACCATTAAGGGGTATGAGGATGTCCCTGCAAACAATGAGAAGGCACTGCAAAAGGCTGTGGTCAATCAACCAGTGTCTGTAGCCATAGATGCCAGTGGCTCTGACTTTCAATTTTACGAGAGTGGTGTATTCACTGGGTCATGTGGAACAGAATTAGATCACGGTGTCACAGCTGTGGGATATGGTGTTAGTGATGATGGAACCGAGTATTGGCTGGTAAAGAACTCGTGGGGAACCGAGTGGGGTGAAGAAGGCTACATTAGGATGCAAAGAGGTGTGGATTCTAAGGAAGGACTCTGTGGCATAGCCATGCAAGCGTCTTACCCTACTGCATAA 792 0.4583 MATKTQFYHISLTLLFCMAIWAFQVTSRTLQDASMNERHEEWMTRYDRVYKDPQEREKRLRIFKENVNYIEAFNNAANKPYKLAVNQFADLTNEEFIAPRNRFKGHMCSAITRTTSFKYENVTAVPSTVDWRQKGAVTPVKDQGQCASSHAATIKGYEDVPANNEKALQKAVVNQPVSVAIDASGSDFQFYESGVFTGSCGTELDHGVTAVGYGVSDDGTEYWLVKNSWGTEWGEEGYIRMQRGVDSKEGLCGIAMQASYPTA 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01501 263 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 222 241 IPR025661 -
Phco9g01501 263 Pfam Cathepsin propeptide inhibitor domain (I29) 39 96 IPR013201 -
Phco9g01501 263 FunFam Uncharacterized protein 162 262 - -
Phco9g01501 263 Gene3D Cysteine proteinases 151 263 - -
Phco9g01501 263 SMART pept_c1 125 262 IPR000668 GO:0006508|GO:0008234
Phco9g01501 263 Gene3D Cysteine proteinases 22 150 - -
Phco9g01501 263 CDD Peptidase_C1A 126 261 IPR039417 -
Phco9g01501 263 SMART Inhibitor_I29_2 39 96 IPR013201 -
Phco9g01501 263 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 204 214 IPR025660 -
Phco9g01501 263 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 28 151 IPR013128 GO:0008234
Phco9g01501 263 SUPERFAMILY Cysteine proteinases 34 261 IPR038765 -
Phco9g01501 263 Pfam Papain family cysteine protease 151 262 IPR000668 GO:0006508|GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01501 Phco-Chr9 35147719 35148828 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01501 9 35147719 35148828 Phco9g01501 9 35147719 35148828 ECH
Phco11g00472 11 3201879 3203643 Phco9g01501 9 35147719 35148828 ECH