Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01252 ATGAGGCGAAGGAGCGTAGATTTTCGAAGACCAGGGAGGAGGAGGCTCCAGGATGTAGTGTGGTGGACATCGTGTACCGTTTTGCTTCTTTTCTTTATTTATATTCTCGCCAAAGGCTCCACCAAAATTGACTCCACTTACCAATTCTCAAGGAGAACTTTCAGGCGTGAGAGGGTTATTGAAGGCTTCAATGTTACGGATGAGATGCTAAGCCCCGAGTCTGTGACCAGACAAATTAATGATCAAATCTCACTAGCAAAAGCTTTTGTTGTAATTGCCAAAGAAAGTAATAACCACCAATTTGCTTGGGAGTTAACTTCTCAGATCCGCATTTCGCAGATTTTTCTCTCAAATGCTGCTACGAGGCGTACTCCATTAACAATCAATGAATCACAATATGCTATTCGTGATATGGCCTTATTACTATTTCAGGCCCAGCAGCTCCATTATGACAGTGCAAGCATGATCATGAGACTGAAAGGAAAAATTCAAGCTCTTGAAGAACAGATGAGTTCTGCAAGTGAGAAGAGTTCAAAATATGGACAAATAGCTGCTGAAGAAGTCCCAAAGAGCCTATTTTGCCTTGGTGTCAGGTTGACATCTAAATGGTTCAAGAATCTTAGCCTGCATAAGAATTTGAAGGACCAAAGACAAGTGGACATGAAACTGAAGGATAATGATCTTTACCACTTCTGTGTCTTTTCTGATAACATCCTTGCTACCTCAGTTGTGATAAATTCCACTTCAATAAATTCCAAAATTCCAGATAAGATTGTTTTTCACCTTGTCACAGATGAAATAAACTATGCTGCAATGAAGGCATGGTTTTCTTTGAACGATTTTCGAGGGGTGACAGTTGAAGTTCAAAGGTTTGAAGACTTCAGTTGGTTGAATGCTTCATATGTTCCTGTGCTTAAGCAGCTTCAAGACTCAGAGATACAGAACTATTACTTCAAAGGCAACACTGATGATAGCAAGACTCCCATCAAGTTCAGGAATCCGAAATATCTGTCCATGCTTAACCACCTGAGGTTCTACATCCCTGAAGTTTTTCCTGAGCTGAAGAAAGTGGTGTTCCTGGATGATGATGTTGTGGTTCAGAAGGATCTTTCTGATCTTTTTACCATTGATTTGAACGGCAATGTCAATGGAGCCGTTGAGACATGCATGGAGACATTTCATAGATACCATAAATATTTGAATTACTCACACCCTCTAATAAGAACACATTTTGATCCTGATGCTTGTGGATGGGCATTTGGCATGAATGTGTTTGATTTGGTTCAATGGAGGAAAAGGAATGTGACAGGAATCTACCACTATTGGCAAGAAAAGAATGCAGACAGGACATTGTGGAAACTTGGTACCTTGCCACCTGGTTTGTTAACCTTCTATGGTCTTACTGAGCCCTTGGATCCATCATGGCATGTGCTGGGTTTTGGCTACACAAATGTTGATCCTCAGTTTATAGAAAGAGGGGCTGTTCTACACTTCAATGGCAACTCCAAACCGTGGTTGAAGATTGGGATGGAAAAGTACAAGCCTCTGTGGGAAAAATACGTGGATTATTCTCACCCAATATTGCAACAGTGTAATTTCCATTGA 1605 0.4075 MRRRSVDFRRPGRRRLQDVVWWTSCTVLLLFFIYILAKGSTKIDSTYQFSRRTFRRERVIEGFNVTDEMLSPESVTRQINDQISLAKAFVVIAKESNNHQFAWELTSQIRISQIFLSNAATRRTPLTINESQYAIRDMALLLFQAQQLHYDSASMIMRLKGKIQALEEQMSSASEKSSKYGQIAAEEVPKSLFCLGVRLTSKWFKNLSLHKNLKDQRQVDMKLKDNDLYHFCVFSDNILATSVVINSTSINSKIPDKIVFHLVTDEINYAAMKAWFSLNDFRGVTVEVQRFEDFSWLNASYVPVLKQLQDSEIQNYYFKGNTDDSKTPIKFRNPKYLSMLNHLRFYIPEVFPELKKVVFLDDDVVVQKDLSDLFTIDLNGNVNGAVETCMETFHRYHKYLNYSHPLIRTHFDPDACGWAFGMNVFDLVQWRKRNVTGIYHYWQEKNADRTLWKLGTLPPGLLTFYGLTEPLDPSWHVLGFGYTNVDPQFIERGAVLHFNGNSKPWLKIGMEKYKPLWEKYVDYSHPILQQCNFH 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01252 534 Pfam Glycosyl transferase family 8 236 508 IPR002495 GO:0016757
Phco9g01252 534 Coils Coil 156 176 - -
Phco9g01252 534 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 67 533 IPR029993 GO:0047262
Phco9g01252 534 CDD GT8_like_1 229 522 - -
Phco9g01252 534 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 230 529 IPR029044 -
Phco9g01252 534 SUPERFAMILY Nucleotide-diphospho-sugar transferases 229 532 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01252 Phco-Chr9 12604768 12607152 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01252 9 12604768 12607152 Phco9g01252 9 12604768 12607152 ECH
Phco10g01233 10 34449643 34452361 Phco9g01252 9 12604768 12607152 PCT