Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01243 ATGGCGGTGGAGAGTGACAAAACGGGTTCTGATGGGAAAGTTTGGAGCTTTTGTAGTATGCCATTTTGGCAAACAACTCATCCTTCTTCATCTTCTTCTTCAACTTCCTCTATGCATAACAGTGTTCACCATCAGAGCCAGATTCTTCAGTCTCTTGATAGATCCACTCATCAACCTTCCACCACTGTTTCTTCTGTGGCTAAGTCTTTGCTTCCCACAAGGAGAAGGCTTCGTCTTGATCCTCCCAGCAAGCTCTACTTTCCTTATGAACCTGGTAAGCAAGTTAGGAGCGCCATCACAATTAAAAACACTTGCAAGTCTCATGTAGCTTTCAAGTTTCAAACAACTGCACCCAAGAGTTGTTATATGCGCCCTCCGGGTGGTATACTTGCACCCGGTGAAAGTATAATTGCAACTGTGTTTAAGTTTGTGGAGCCACCAGAGAACAATGAGAAACCAATTGATCAGAAAAGCAGGGTCAAGTTCAAAATCATGAGCTTAAAAGTGAAAGGCGAAATGGATTATGTACCAGAACTGTTTGATGAGCAAAGGGATCATGTTGCAGTGGAGCAAATTTTGCGTGTCATTTTTCTGGACCCTGAACACCCTAGCCCTGCTTTGGATAAGCTTAAACGGCAGTTAGCTGAGGCAGAGGCTGCATTGGAAGCAAGAAAGAAGCCCCCAGAGGAGACAGGTCCTCGAGTAGCTGGTGAAGGACTTGTTATAGATGAATGGAAAGAAAGAAGAGAAAGATACCTGGCCAAGCAGCAGGTTGAAGTGGTAGATTCAGTGTAA 795 0.444 MAVESDKTGSDGKVWSFCSMPFWQTTHPSSSSSSTSSMHNSVHHQSQILQSLDRSTHQPSTTVSSVAKSLLPTRRRLRLDPPSKLYFPYEPGKQVRSAITIKNTCKSHVAFKFQTTAPKSCYMRPPGGILAPGESIIATVFKFVEPPENNEKPIDQKSRVKFKIMSLKVKGEMDYVPELFDEQRDHVAVEQILRVIFLDPEHPSPALDKLKRQLAEAEAALEARKKPPEETGPRVAGEGLVIDEWKERRERYLAKQQVEVVDSV 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01243 264 ProSiteProfiles Major sperm protein (MSP) domain profile. 76 198 IPR000535 -
Phco9g01243 264 FunFam vesicle-associated protein 4-1-like 72 201 - -
Phco9g01243 264 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 75 258 IPR016763 GO:0005789
Phco9g01243 264 Gene3D Immunoglobulins 72 202 IPR013783 -
Phco9g01243 264 Pfam MSP (Major sperm protein) domain 77 187 IPR000535 -
Phco9g01243 264 MobiDBLite consensus disorder prediction 27 67 - -
Phco9g01243 264 SUPERFAMILY PapD-like 65 205 IPR008962 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01243 Phco-Chr9 12479291 12482678 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01243 9 12479291 12482678 Phco9g01243 9 12479291 12482678 ECH
Phco10g01238 10 34490917 34494494 Phco9g01243 9 12479291 12482678 PCT