Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01238 ATGATTGCAGAGAGGGAAGAATCGCAAGAACTGTGTGGCGTGAAACGGATTTCAAACACAGAAATCAAATCCACAGAATTGGGTGCATTGAGTCCGAAGCCAATTTTTCATTCCATCACAGTAAAATTGATGCCACCATCTCTGCTACAAGTTGTCTCACTCATAGAGGTACTTACCAGTACGCGGCGTTTCTCTGACCCAGTTGCCGGAAGTGGCGGTTCCAGGTGGATTCCGGGTGGAATGGAGGTGGAGAGTGAAAAATCAGGGTCTGATGGGAAGGTTTGGAGTTTTTGTAGAATGCCATTTTGGCAAACAACTCAGACTCCATCTTCTTCTTCATCTTCCATGTCTTACAACATGCACAATGTTCATCAACAAAATCAGAATAATCTTCAATCTGTTGATAGATCCGGTCCGCATTCTTCAACCACAGTCTTATCCGTGGCAAAGTCTCTGCTCCCTACAAAGAGGAGGCTCCGTCTTGATCCTACCAACAAGCTTTACTTTCCGTATGAACCTGGTAAGCAAGTTAGGAGTGCAATCGCAATTGAAAACACTTGCAAGTCTCATGTAGCTTTCAAGTTTCAAACAACAGCACCCAAGAGTTGTTATATGCGTCCTCCAGGTGGTGTTCTTGCCCCTGGTGAAAGTATAATTGCTACTGTATTCAAGTTTGTGGAGCCACCAGAGAACAATGAGAAACCAATTGATCAGAAAAGCAAGGTTAAGTTTAAAATCATGAGCCTAAAAGTGCAAGGTGAAATCGACTATGTACCGGAACTGTTTGATGAGCAAAGAGATCAAGTGGCAATAGAGCAAATTCTACGGGTTGTTTTTTTGGACCTTGAACGGCCTAGTCCTGCACTGGATAAGCTCAAACGGATGTTGGCTGTGGCTGACGCAGCACTTGAAGCGCGAAAGAAACTGCCAGAGGAGAAAGGTCCTCGAGTAGCCGGTGAAGGCCTTGTTATAGATGAATGGAAAGAAAGAAGAGAAAGATACTTGGCCCAACAGCAGGTCGAAGGTGCTGATTCAGTGTAA 1041 0.4457 MIAEREESQELCGVKRISNTEIKSTELGALSPKPIFHSITVKLMPPSLLQVVSLIEVLTSTRRFSDPVAGSGGSRWIPGGMEVESEKSGSDGKVWSFCRMPFWQTTQTPSSSSSSMSYNMHNVHQQNQNNLQSVDRSGPHSSTTVLSVAKSLLPTKRRLRLDPTNKLYFPYEPGKQVRSAIAIENTCKSHVAFKFQTTAPKSCYMRPPGGVLAPGESIIATVFKFVEPPENNEKPIDQKSKVKFKIMSLKVQGEIDYVPELFDEQRDQVAIEQILRVVFLDLERPSPALDKLKRMLAVADAALEARKKLPEEKGPRVAGEGLVIDEWKERRERYLAQQQVEGADSV 346
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01238 346 Pfam MSP (Major sperm protein) domain 159 269 IPR000535 -
Phco10g01238 346 Gene3D Immunoglobulins 154 281 IPR013783 -
Phco10g01238 346 SUPERFAMILY PapD-like 149 287 IPR008962 -
Phco10g01238 346 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 156 340 IPR016763 GO:0005789
Phco10g01238 346 ProSiteProfiles Major sperm protein (MSP) domain profile. 158 280 IPR000535 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Phco10g01238 Phco-Chr10 34490917 34494494 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01238 10 34490917 34494494 Phco10g01238 10 34490917 34494494 ECH
Phco10g01238 10 34490917 34494494 Phco9g01243 9 12479291 12482678 PCT