Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01230 ATGGAGTTTGACCTTGAAAACCCTTTGGAAAATCTTCACTCCGATGCTGTCTCTTACCTCTTCCTCATTGAATCTGACCACACCCCATTACAGAATCATTCTCACACTCACAAACCCAAAGATCTTGACATCTCTATCAGAGGAGAACTTGTTTCCTTAATCTCACAGCTGTCCTGCATTTTGGATCCGGCTTTGTCTTATCTTGCTACCAACTATCTGGATCGGTTCCTAGCCAGCCAAGGGATTTCGCAACCGAAGCCATGGATCCTCAGGCTCATTGCTGTCTCTTGCATTTCTCTTGCTGTCAAGATGATGAGAACTGAATGCCCTGATGTTCAGGCTCTTTTGAGTCAAAGTGATGGGGGCATAATGTTTGAGACACAAACAGTGCGAAGAATGGAAGCACTTATCTTGGGAGCATTACAATGGAGAATGCGGTCGATCACCCCATTCTCTTTCATACCTTTCTTCATTGCCTTGATGGGGCTCAAAGGCTCACCAATGGGGACGGTTCTGAAAAACCGTGCCTCTGAAATCATATTCATGTCACAAAGAGAGATAAGGCTTTGGGAGTTCAAGCCATCTATAATTGCTGCATCTGCCCTTTTGTGTGCTTCTCATGAGTTGTTTCCTTTTCAATATCCCTCCTTGAATGCAATAATCGATTCTTCATATGTAAAAAAAGAAAGCGTGGAGCAGTGCTACAAAGTGATACAAGACATAGCCATAGAGGAGGAGTACGAGTCTGCGTTGAATGGGGTTTCAAGGTCAGACACGCCGATTAATGTGTTGGACCATCATTTTCTGAGTTCAGAAAGTGAAAAATCCAACGGAATCACCGTTGCTGATTCTCCTCTGAGACAAGAGAGGGACCTCAAAAGACGGAAAATCACTCCATGTGGAAACAATCCAACGATCCACAATTCTTGGATTAACTAA 939 0.4377 MEFDLENPLENLHSDAVSYLFLIESDHTPLQNHSHTHKPKDLDISIRGELVSLISQLSCILDPALSYLATNYLDRFLASQGISQPKPWILRLIAVSCISLAVKMMRTECPDVQALLSQSDGGIMFETQTVRRMEALILGALQWRMRSITPFSFIPFFIALMGLKGSPMGTVLKNRASEIIFMSQREIRLWEFKPSIIAASALLCASHELFPFQYPSLNAIIDSSYVKKESVEQCYKVIQDIAIEEEYESALNGVSRSDTPINVLDHHFLSSESEKSNGITVADSPLRQERDLKRRKITPCGNNPTIHNSWIN 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01230 312 PANTHER CYCLINS 16 249 IPR039361 -
Phco9g01230 312 SUPERFAMILY Cyclin-like 129 243 IPR036915 -
Phco9g01230 312 Pfam Cyclin, N-terminal domain 21 145 IPR006671 -
Phco9g01230 312 FunFam D6-type cyclin 143 236 - -
Phco9g01230 312 FunFam D6-type cyclin 30 142 - -
Phco9g01230 312 Gene3D - 22 236 - -
Phco9g01230 312 SUPERFAMILY Cyclin-like 13 145 IPR036915 -
Phco9g01230 312 Gene3D - 30 146 - -
Phco9g01230 312 SMART cyclin_7 48 139 IPR013763 -
Phco9g01230 312 CDD CYCLIN_AtCycD-like_rpt2 148 238 - -
Phco9g01230 312 SMART Cyclin_C_2 148 260 IPR004367 -
Phco9g01230 312 Pfam Cyclin, C-terminal domain 148 246 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01230 Phco-Chr9 12236689 12238348 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01230 9 12236689 12238348 Phco9g01230 9 12236689 12238348 ECH
Phco10g01256 10 34691718 34693412 Phco9g01230 9 12236689 12238348 PCT