Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco10g01256 ATGCTCATTCTTTCTTACTCTTCCATACCTTTAACCAAGACCAACTTCACAAAACAGACTTGTTTCTCCTCCATGGATTTTAACCTTGAATACCCTCTTGGAAACTTCCACGACCTTCCCTCCGATGCTCTCCCTTCCCTCTTCCTCATCGAATCCGACCACATCCCTCCACCCAATTACTGTCAAACTCTTAAAGCAAGCGACTTCGACATCTCTGTTAGAAGAAATGTTGTCTCTTTGATTTCACAGTTGTCCTGCTCTTTCGATCCAGTTCTTCCTTACCTAGCTATCAACTACTTGGATCGCTTCCTCGCTAACCAAGGAATATTGCAACCAAAGCCGTGGGCAAACAAGCTTCTTGCAATATCTTGTTTTTCTTTAGCGGCCAAGATGTTGAAAGCAGAGTACTCTGCCACTGATGTCCAGGTTCTGCTGAATCATGGTGAAGGAGGTGTAATTTTCGAGACACAAACAGTTCAAAGAATGGAGGGCATTGTCTTAGGGGCTCTCCAGTGGCGAATGCGTTCGATCACCCCCTTTTCTTTCGTTCCCTTCTTCGTGGATTTCTTCAGGCTCAAAGACCCTGCATTTAGGCAGGTTCTGAAGGATCGAGCATCTGAAATCATTCTAAAGTCACAAAGAGAGATAAAGGTCTTGGAATTCAAGCCATCTATAGTTGCTGCGTCAGCCCTTCTGTATGCTTCACATGAGTTGTTTCCTTTTCAATATCCATGCTTCTTGAGAGCAATATCCGACTGTTCGTATGTTAACAAAGAAACTGTGGTGCAATGTTATAATGTGATACAGGACATAGCCAGGGAGGAGTACGAATCTGTGTTGAATATAAATTCAACTTCAGACACACCAGTTAATGTGTTAGACGAACATTTTCTAAGCTTGGAAAGTGAAAAAACCAACGGGGTGATACAAGAGCAGGAGTTCAAAAGAAGGAAAATCACCGATTATGGCAACAAACACACGGTCCCGTTTTCTCATTTTCATCAATGCTGA 1011 0.4293 MLILSYSSIPLTKTNFTKQTCFSSMDFNLEYPLGNFHDLPSDALPSLFLIESDHIPPPNYCQTLKASDFDISVRRNVVSLISQLSCSFDPVLPYLAINYLDRFLANQGILQPKPWANKLLAISCFSLAAKMLKAEYSATDVQVLLNHGEGGVIFETQTVQRMEGIVLGALQWRMRSITPFSFVPFFVDFFRLKDPAFRQVLKDRASEIILKSQREIKVLEFKPSIVAASALLYASHELFPFQYPCFLRAISDCSYVNKETVVQCYNVIQDIAREEYESVLNINSTSDTPVNVLDEHFLSLESEKTNGVIQEQEFKRRKITDYGNKHTVPFSHFHQC 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco10g01256 336 CDD CYCLIN_AtCycD-like_rpt2 177 268 - -
Phco10g01256 336 SUPERFAMILY Cyclin-like 158 273 IPR036915 -
Phco10g01256 336 SMART Cyclin_C_2 177 292 IPR004367 -
Phco10g01256 336 Gene3D - 46 266 - -
Phco10g01256 336 FunFam D6-type cyclin 57 172 - -
Phco10g01256 336 Pfam Cyclin, N-terminal domain 51 174 IPR006671 -
Phco10g01256 336 SMART cyclin_7 75 168 IPR013763 -
Phco10g01256 336 SMART cyclin_7 184 270 IPR013763 -
Phco10g01256 336 FunFam D6-type cyclin 173 266 - -
Phco10g01256 336 PANTHER CYCLINS 56 278 IPR039361 -
Phco10g01256 336 Gene3D - 57 175 - -
Phco10g01256 336 Pfam Cyclin, C-terminal domain 177 275 IPR004367 -
Phco10g01256 336 SUPERFAMILY Cyclin-like 38 174 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco10g01256 Phco-Chr10 34691718 34693412 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco10g01256 10 34691718 34693412 Phco10g01256 10 34691718 34693412 ECH
Phco10g01256 10 34691718 34693412 Phco9g01230 9 12236689 12238348 PCT