Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco9g01120 ATGGCGGAAACGTTAAGCCCCAACCCCTTGGTGGGTCAGAAGCAGAGGTTCCGTATCCAGTCCCCTACCACTACCTTCTTCTTGGGCTCCAATAACGACCAGCTCGAGCGCGCCGAGGCCCGAGCCGCGCGGGCCGCCGCCATCCGCCGAAAGAGCCTCGGGTTCAGCCAACCTCTTCAGGCCAACTCGGATCCCTGCCTCAACAAACAGCAGATCCTCGATTTGTTCCAAAACTGCATCAAACTCGCCAGCGAAAACAAAATTAATCAGAAAAATACGTGGGAGTTGAACCTGATTGATCACCTTACTGATATCATCAAGGCCGAGCAAGAAGATGACGCGGAGACTAATTTTCAAAAAGCAAGCTGCACTCTTGAGGCTGGAGTCAAAATTTATTCACTAAGAGTAGATTCAGTGCATTCTGAGGCATATAAAGTTCTTGGCGGGATGAATAGAGCAGGCCAAGAAGCGGAGCAAGACACTAGCCTGGATGGTGTTAATATTGAAAGTGGAGAAGAAGAAAGCAGGAAAGAAACAAGCAAAAAGTTGTCACCTTTGTCAACATTGGAATCATCTTTCGAGGCACTTAACGTAAAGAAGTTTGATGCTGCATTTGTCGTGGATCCTCTCTATCGCCAGACAACAGCAAAATTTGATGAAGGTGGAGCCAAGGGTCTTTTAATGAATAATCTCGGTGTATATGGTGGATGTAGGGTGCTCTTTGATTCACTAGAAGTGCCTGCGAAGTGTATGGCAAAACAAAATCAATCTGATATTTCAGATACTATTGATCTTTCTTTTGTCAAAGATTGTATGGAGCAGATGGTGTTGGACATGCGTGTTAAGGATGAAATTTCTCCAACTCTGAGGACTATAGTAAGCCTATTTGATGAAAGTAACAGAAGGCCCACTGATGTTCAACTTCACGACAAGAATTCAGCTGAAGATCTTGACACCTCTTCTTTTAATAATGAAAGTGGTTTTGACAGAGAAGAATATGAGAACAGCACGACCTGGAGTGACGATCACGATGACCAAACGGTTCTTGCCGATGTAGGCTATAATGATGATGAAGATCCAAGTTTTCCCAATTACCCTCAGGACAATGATGAGCCATTTCCGTCCCGAGACGCTGATGTGGATGACAGATTTGACAATGTCGACGGATATTTGTTTTTGAGTCTGGGTTTTAATTCAAAACAAAATGCCTGGGCAGGACCTGATCATTGGAAGTATCGAAAATCCAAAGCCTCAGAGGTTCATCCCACTTCTGAAGATGGATCGACCCTAAAAAGTAGGCAGCCAAAGAGTAAGAGACAGGCTGAAGTTGAATTAAATTTCACAAATTCTCTTGAGAAAGAAATGCTAGATATATTTTCTACTCCCAAGAATCCCAAATCATTACTACTTCCCGAAAGCAGATTGCCTTGCAATACAAAACTTCCCGAGGACTGCCACTATCAGCCAGAGGATCTTGTCAAGTTATTCCTTCTGTCTAATGTGAAGTGTCTCGGGAGGAGGGCAAACAGGCTTGCAGATGGATCTAGAGAACAATCCAATGAATATGAATCATTCCCTTCGTGGGACAATGGAAGTGTTGGTGGGGATGACTATGGTGATTACGGAGGTGATCATAGTGACATGGAGGACTCCGACACTCTTATTACTCAGCCTCGCCAGGTCAATAAAATTGAAGTCCAGTATGACAAGACTTCCAAACAAGTTGATGTTCATGCACTAAAAATTACTATTTGGGACCATGTTCAAGAATCTGTTAAACTTCCTTTGCAGGGACAAAAAGATACCTTATCTTTCAGGAATATATTGGCCAACTTTCCTAGCGAATGCAATGCTGCTGCAACCATTAGTGACATCTCTCCTCACTTGTGCTTCATATGTCTATTGCATCTGGCAAACGAGAAAGGATTGAGCATTCAAAACTGCTCCAACTTGGATGATCTTACCATATGCCTTCCACATGTTGCCGACTCTATAAGGGGAACAGTTTAG 2010 0.4368 MAETLSPNPLVGQKQRFRIQSPTTTFFLGSNNDQLERAEARAARAAAIRRKSLGFSQPLQANSDPCLNKQQILDLFQNCIKLASENKINQKNTWELNLIDHLTDIIKAEQEDDAETNFQKASCTLEAGVKIYSLRVDSVHSEAYKVLGGMNRAGQEAEQDTSLDGVNIESGEEESRKETSKKLSPLSTLESSFEALNVKKFDAAFVVDPLYRQTTAKFDEGGAKGLLMNNLGVYGGCRVLFDSLEVPAKCMAKQNQSDISDTIDLSFVKDCMEQMVLDMRVKDEISPTLRTIVSLFDESNRRPTDVQLHDKNSAEDLDTSSFNNESGFDREEYENSTTWSDDHDDQTVLADVGYNDDEDPSFPNYPQDNDEPFPSRDADVDDRFDNVDGYLFLSLGFNSKQNAWAGPDHWKYRKSKASEVHPTSEDGSTLKSRQPKSKRQAEVELNFTNSLEKEMLDIFSTPKNPKSLLLPESRLPCNTKLPEDCHYQPEDLVKLFLLSNVKCLGRRANRLADGSREQSNEYESFPSWDNGSVGGDDYGDYGGDHSDMEDSDTLITQPRQVNKIEVQYDKTSKQVDVHALKITIWDHVQESVKLPLQGQKDTLSFRNILANFPSECNAAATISDISPHLCFICLLHLANEKGLSIQNCSNLDDLTICLPHVADSIRGTV 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco9g01120 669 MobiDBLite consensus disorder prediction 415 441 - -
Phco9g01120 669 Pfam Condensin complex subunit 2 65 512 IPR022816 GO:0000796|GO:0007076
Phco9g01120 669 Pfam Condensin complex subunit 2 547 656 IPR022816 GO:0000796|GO:0007076
Phco9g01120 669 PIRSF Condensin_H 537 659 IPR022816 GO:0000796|GO:0007076
Phco9g01120 669 PIRSF Condensin_H 1 270 IPR022816 GO:0000796|GO:0007076
Phco9g01120 669 PIRSF Condensin_H 266 550 IPR022816 GO:0000796|GO:0007076
Phco9g01120 669 MobiDBLite consensus disorder prediction 155 183 - -
Phco9g01120 669 PANTHER CONDENSIN COMPLEX SUBUNIT 2 20 660 IPR022816 GO:0000796|GO:0007076
Phco9g01120 669 MobiDBLite consensus disorder prediction 325 350 - -
Phco9g01120 669 MobiDBLite consensus disorder prediction 512 533 - -
Phco9g01120 669 MobiDBLite consensus disorder prediction 303 379 - -
Phco9g01120 669 MobiDBLite consensus disorder prediction 169 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco9g01120 Phco-Chr9 10321729 10325941 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco9g01120 9 10321729 10325941 Phco9g01120 9 10321729 10325941 ECH
Phco10g01340 10 35897721 35901556 Phco9g01120 9 10321729 10325941 PCT